RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 COL4A3Q01955 1670 aa5.65□□□□□ -1.51
CTNND1-233ENST00000532787 LINC01548A6NM66 108 aa5.65□□□□□ -1.51
CTNND1-233ENST00000532787 CSDC2Q9Y534 153 aaKnown RBP5.65□□□□□ -1.51
CTNND1-233ENST00000532787 CACNA1HO95180 2353 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 DEFB4AO15263 64 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 GTF3C1Q12789 2109 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 CRIP3Q6Q6R5 217 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 Q6ZPA2 131 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 C9orf85Q96MD7 179 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 DENND4CQ5VZ89 1909 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 DEFB131BA0A096LNP1 70 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 SLPIP03973 132 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
CTNND1-233ENST00000532787 KLLNB2CW77 178 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 IGHV4-31P0DP07 118 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 POLR2KP53803 58 aaKnown RBP5.63□□□□□ -1.51
CTNND1-233ENST00000532787 ZNF106Q9H2Y7 1883 aaKnown RBP5.63□□□□□ -1.51
CTNND1-233ENST00000532787 TNCP24821 2201 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 UBE2D1P51668 147 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 LELP1Q5T871 98 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 Q8IZM0 81 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 COL6A6A6NMZ7 2263 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 WFDC10BQ8IUB3 73 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 DSCAML1Q8TD84 2053 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 A0A087WZ39 114 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 Q8NA96 180 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 PSMG3-AS1Q96PY0 264 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 TRAV10A0A0B4J240 114 aa5.63□□□□□ -1.51
CTNND1-233ENST00000532787 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 LRCOL1A6NCL2 159 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 Q8N6K4 173 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 MALRD1Q5VYJ5 2156 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 A0A0J9YWU9 116 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 LINC00526Q96FQ7 95 aa5.62□□□□□ -1.51
CTNND1-233ENST00000532787 RNASE3P12724 160 aaKnown RBP5.62□□□□□ -1.51
CTNND1-233ENST00000532787 A0A1W2PNU3 283 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-233ENST00000532787 C1orf229Q6ZS94 237 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-233ENST00000532787 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 TMEM131Q92545 1883 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 LINC00959A0A1B0GUT2 108 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 F8WDY8 70 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
CTNND1-233ENST00000532787 Q6ZQY7 126 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 C11orf71Q6IPW1 123 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 PRORYQ9H606 182 aa5.61□□□□□ -1.51
CTNND1-233ENST00000532787 CHCHD7Q9BUK0 85 aa5.6□□□□□ -1.51
CTNND1-233ENST00000532787 ZNF73O43830 326 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-233ENST00000532787 PSPHP1O15172 72 aa5.6□□□□□ -1.51
CTNND1-233ENST00000532787 UBE2D2P62837 147 aa5.59□□□□□ -1.51
CTNND1-233ENST00000532787 ADAMTS9Q9P2N4 1935 aa5.59□□□□□ -1.51
CTNND1-233ENST00000532787 NRGNQ92686 78 aa5.59□□□□□ -1.51
CTNND1-233ENST00000532787 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
CTNND1-233ENST00000532787 WFDC10AQ9H1F0 79 aa5.59□□□□□ -1.51
CTNND1-233ENST00000532787 UBE2D3P61077 147 aa5.59□□□□□ -1.52
CTNND1-233ENST00000532787 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.52
CTNND1-233ENST00000532787 C3orf84H3BNL1 204 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 Q6ZSV7 163 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 PPDPFQ9H3Y8 114 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 USF3Q68DE3 2245 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 IGIPA6NJ69 53 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 IGLV1-40P01703 118 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
CTNND1-233ENST00000532787 ZNF702PQ9H963 129 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 CDC42SE2Q9NRR3 84 aa5.58□□□□□ -1.52
CTNND1-233ENST00000532787 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
CTNND1-233ENST00000532787 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
CTNND1-233ENST00000532787 BBC3Q96PG8 261 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-233ENST00000532787 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
CTNND1-233ENST00000532787 COX8CQ7Z4L0 72 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 Q8N976 141 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 KIAA1549LQ6ZVL6 1849 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 PROK1P58294 105 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 DCANP1Q8TF63 244 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 C11orf21Q9P2W6 132 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 BRI3O95415 125 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 ACACAQ13085 2346 aa5.56□□□□□ -1.52
CTNND1-233ENST00000532787 GOLGB1Q14789 3259 aaKnown RBP5.56□□□□□ -1.52
CTNND1-233ENST00000532787 Q6ZS46 218 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 NOTCH4Q99466 2003 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 CRIP2P52943 208 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-233ENST00000532787 PRR9Q5T870 116 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 KPRPQ5T749 579 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-233ENST00000532787 Q8N814 137 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 NAV3Q8IVL0 2385 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 MED13Q9UHV7 2174 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 A0A096LNI7 61 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 FAM30AQ9NZY2 134 aa5.55□□□□□ -1.52
CTNND1-233ENST00000532787 KIF26AQ9ULI4 1882 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-233ENST00000532787 LTBP2Q14767 1821 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms