RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
CCS-207ENST00000531990 Q8N8P6 123 aa13.78□□□□□ -0.2
CCS-207ENST00000531990 LECT2O14960 151 aa13.77□□□□□ -0.21
CCS-207ENST00000531990 FABP9Q0Z7S8 132 aa13.77□□□□□ -0.21
CCS-207ENST00000531990 Q8N814 137 aa13.77□□□□□ -0.21
CCS-207ENST00000531990 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
CCS-207ENST00000531990 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
CCS-207ENST00000531990 TIMM21Q9BVV7 248 aa13.76□□□□□ -0.21
CCS-207ENST00000531990 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
CCS-207ENST00000531990 UBE2D4Q9Y2X8 147 aa13.76□□□□□ -0.21
CCS-207ENST00000531990 CSDC2Q9Y534 153 aaKnown RBP13.76□□□□□ -0.21
CCS-207ENST00000531990 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
CCS-207ENST00000531990 CDC42SE2Q9NRR3 84 aa13.75□□□□□ -0.21
CCS-207ENST00000531990 K7EMI3 77 aa13.74□□□□□ -0.21
CCS-207ENST00000531990 WFDC2Q14508 124 aa13.74□□□□□ -0.21
CCS-207ENST00000531990 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
CCS-207ENST00000531990 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
CCS-207ENST00000531990 RPL39P62891 51 aaKnown RBP13.73□□□□□ -0.21
CCS-207ENST00000531990 ORMDL2Q53FV1 153 aa13.73□□□□□ -0.21
CCS-207ENST00000531990 SMCO4Q9NRQ5 59 aa13.73□□□□□ -0.21
CCS-207ENST00000531990 IGLV5-52A0A0A0MRZ9 124 aa13.72□□□□□ -0.21
CCS-207ENST00000531990 KRTAP26-1Q6PEX3 210 aa13.72□□□□□ -0.21
CCS-207ENST00000531990 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
CCS-207ENST00000531990 SPANXA1Q9NS26 97 aa13.72□□□□□ -0.21
CCS-207ENST00000531990 IFI27P40305 119 aaPredicted RBP13.71□□□□□ -0.21
CCS-207ENST00000531990 SS18Q15532 418 aa13.71□□□□□ -0.21
CCS-207ENST00000531990 PRSS3P2Q8NHM4 247 aa13.71□□□□□ -0.21
CCS-207ENST00000531990 FUSP35637 526 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCS-207ENST00000531990 CHCHD10Q8WYQ3 142 aaPredicted RBP13.7□□□□□ -0.22
CCS-207ENST00000531990 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.69□□□□□ -0.22
CCS-207ENST00000531990 LINC00959A0A1B0GUT2 108 aa13.69□□□□□ -0.22
CCS-207ENST00000531990 GAGE12HA6NDE8 117 aa13.69□□□□□ -0.22
CCS-207ENST00000531990 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
CCS-207ENST00000531990 G0S2P27469 103 aa13.69□□□□□ -0.22
CCS-207ENST00000531990 CYSLTR1Q9Y271 337 aa13.69□□□□□ -0.22
CCS-207ENST00000531990 RNASE13Q5GAN3 156 aaKnown RBP13.68□□□□□ -0.22
CCS-207ENST00000531990 Q6ZUT4 128 aa13.68□□□□□ -0.22
CCS-207ENST00000531990 CBLN2Q8IUK8 224 aa13.68□□□□□ -0.22
CCS-207ENST00000531990 YPEL4Q96NS1 127 aa13.68□□□□□ -0.22
CCS-207ENST00000531990 DNAH11Q96DT5 4516 aa13.67□□□□□ -0.22
CCS-207ENST00000531990 CCL25O15444 150 aa13.67□□□□□ -0.22
CCS-207ENST00000531990 MRPS36P82909 103 aaKnown RBP13.67□□□□□ -0.22
CCS-207ENST00000531990 PKHD1P08F94 4074 aa13.66□□□□□ -0.22
CCS-207ENST00000531990 GCSHP23434 173 aa13.66□□□□□ -0.22
CCS-207ENST00000531990 XCL1P47992 114 aa13.66□□□□□ -0.22
CCS-207ENST00000531990 C2orf66Q6UXQ4 117 aa13.66□□□□□ -0.22
CCS-207ENST00000531990 PYGO1Q9Y3Y4 419 aa13.66□□□□□ -0.22
CCS-207ENST00000531990 C1orf196B1AJZ1 125 aa13.65□□□□□ -0.22
CCS-207ENST00000531990 CFAP161Q6P656 301 aa13.65□□□□□ -0.22
CCS-207ENST00000531990 TRAV13-1A0A0B4J241 112 aa13.64□□□□□ -0.23
CCS-207ENST00000531990 FA2HQ7L5A8 372 aa13.64□□□□□ -0.23
CCS-207ENST00000531990 OPRPNQ99935 248 aaPredicted RBP13.63□□□□□ -0.23
CCS-207ENST00000531990 PRSS1P07477 247 aa13.62□□□□□ -0.23
CCS-207ENST00000531990 CD164L2Q6UWJ8 174 aa13.62□□□□□ -0.23
CCS-207ENST00000531990 TMEM141Q96I45 108 aa13.62□□□□□ -0.23
CCS-207ENST00000531990 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
CCS-207ENST00000531990 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
CCS-207ENST00000531990 FOXI1Q12951 378 aa13.61□□□□□ -0.23
CCS-207ENST00000531990 Q6ZN92 141 aa13.61□□□□□ -0.23
CCS-207ENST00000531990 IGLV4-3A0A075B6K6 122 aa13.6□□□□□ -0.23
CCS-207ENST00000531990 LINC01546A6NGU7 62 aa13.6□□□□□ -0.23
CCS-207ENST00000531990 C18orf32Q8TCD1 76 aa13.6□□□□□ -0.23
CCS-207ENST00000531990 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
CCS-207ENST00000531990 AP5S1Q9NUS5 200 aa13.6□□□□□ -0.23
CCS-207ENST00000531990 HERC2O95714 4834 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 LINC01549A6NIU2 74 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 NPSP0C0P6 89 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 KRTAP10-1P60331 282 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 TEX43Q6ZNM6 134 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 TOMM6Q96B49 74 aa13.59□□□□□ -0.23
CCS-207ENST00000531990 DYNC1H1Q14204 4646 aaKnown RBP13.58□□□□□ -0.24
CCS-207ENST00000531990 CDK2AP2O75956 126 aa13.58□□□□□ -0.24
CCS-207ENST00000531990 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
CCS-207ENST00000531990 C2orf88Q9BSF0 95 aa13.58□□□□□ -0.24
CCS-207ENST00000531990 COX7A2LO14548 114 aa13.57□□□□□ -0.24
CCS-207ENST00000531990 RAB5BP61020 215 aa13.57□□□□□ -0.24
CCS-207ENST00000531990 C15orf56Q8N910 161 aa13.57□□□□□ -0.24
CCS-207ENST00000531990 VCX2Q9H322 139 aa13.57□□□□□ -0.24
CCS-207ENST00000531990 IGIPA6NJ69 53 aa13.56□□□□□ -0.24
CCS-207ENST00000531990 LINC00614P0C842 121 aa13.56□□□□□ -0.24
CCS-207ENST00000531990 MALP21145 153 aa13.56□□□□□ -0.24
CCS-207ENST00000531990 SCGB3A1Q96QR1 104 aa13.56□□□□□ -0.24
CCS-207ENST00000531990 TIMM17AQ99595 171 aa13.56□□□□□ -0.24
CCS-207ENST00000531990 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
CCS-207ENST00000531990 ERASQ7Z444 233 aa13.55□□□□□ -0.24
CCS-207ENST00000531990 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
CCS-207ENST00000531990 HIGD2BQ4VC39 106 aa13.54□□□□□ -0.24
CCS-207ENST00000531990 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
CCS-207ENST00000531990 AMELXQ99217 191 aa13.53□□□□□ -0.24
CCS-207ENST00000531990 APOMO95445 188 aa13.52□□□□□ -0.25
CCS-207ENST00000531990 TRGC2P03986 189 aa13.52□□□□□ -0.25
CCS-207ENST00000531990 CNBPP62633 177 aaKnown RBP13.52□□□□□ -0.25
CCS-207ENST00000531990 LINC01620Q4KN68 170 aa13.52□□□□□ -0.25
CCS-207ENST00000531990 C5orf38Q86SI9 138 aa13.52□□□□□ -0.25
CCS-207ENST00000531990 COLCA2A8K830 154 aa13.51□□□□□ -0.25
CCS-207ENST00000531990 ZNF561-AS1K7EIQ3 104 aa13.5□□□□□ -0.25
CCS-207ENST00000531990 UBE2D1P51668 147 aa13.5□□□□□ -0.25
CCS-207ENST00000531990 LINC00173Q6ZV60 143 aa13.5□□□□□ -0.25
CCS-207ENST00000531990 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
CCS-207ENST00000531990 URB1-AS1Q96HZ7 61 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms