RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 BTF3L4Q96K17 158 aa12.93□□□□□ -0.34
FDFT1-220ENST00000531733 CDC42SE2Q9NRR3 84 aa12.93□□□□□ -0.34
FDFT1-220ENST00000531733 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
FDFT1-220ENST00000531733 EIF5AL1Q6IS14 154 aaKnown RBP12.92□□□□□ -0.34
FDFT1-220ENST00000531733 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
FDFT1-220ENST00000531733 SMIM15Q7Z3B0 74 aa12.92□□□□□ -0.34
FDFT1-220ENST00000531733 CD164L2Q6UWJ8 174 aa12.91□□□□□ -0.34
FDFT1-220ENST00000531733 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
FDFT1-220ENST00000531733 ZNF561-AS1K7EIQ3 104 aa12.9□□□□□ -0.34
FDFT1-220ENST00000531733 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
FDFT1-220ENST00000531733 CAMPP49913 170 aa12.9□□□□□ -0.34
FDFT1-220ENST00000531733 SS18Q15532 418 aa12.9□□□□□ -0.34
FDFT1-220ENST00000531733 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
FDFT1-220ENST00000531733 MRAP2Q96G30 205 aa12.9□□□□□ -0.34
FDFT1-220ENST00000531733 POLR2KP53803 58 aaKnown RBP12.89□□□□□ -0.35
FDFT1-220ENST00000531733 ZNF664Q8N3J9 261 aa12.89□□□□□ -0.35
FDFT1-220ENST00000531733 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
FDFT1-220ENST00000531733 PKIGQ9Y2B9 76 aa12.88□□□□□ -0.35
FDFT1-220ENST00000531733 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
FDFT1-220ENST00000531733 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
FDFT1-220ENST00000531733 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
FDFT1-220ENST00000531733 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
FDFT1-220ENST00000531733 NUP35Q8NFH5 326 aa12.86□□□□□ -0.35
FDFT1-220ENST00000531733 TRBV27A0A0K0K1C4 114 aa12.85□□□□□ -0.35
FDFT1-220ENST00000531733 A8MWL6 223 aa12.85□□□□□ -0.35
FDFT1-220ENST00000531733 C7orf77A4D0Y5 90 aa12.84□□□□□ -0.35
FDFT1-220ENST00000531733 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
FDFT1-220ENST00000531733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.84□□□□□ -0.35
FDFT1-220ENST00000531733 RAB4AP20338 218 aa12.84□□□□□ -0.35
FDFT1-220ENST00000531733 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
FDFT1-220ENST00000531733 C9orf116Q5BN46 136 aaPredicted RBP12.84□□□□□ -0.35
FDFT1-220ENST00000531733 PHF5AQ7RTV0 110 aaKnown RBP12.83□□□□□ -0.36
FDFT1-220ENST00000531733 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
FDFT1-220ENST00000531733 AMN1Q8IY45 258 aa12.83□□□□□ -0.36
FDFT1-220ENST00000531733 COX7A2LO14548 114 aa12.82□□□□□ -0.36
FDFT1-220ENST00000531733 MALP21145 153 aa12.82□□□□□ -0.36
FDFT1-220ENST00000531733 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
FDFT1-220ENST00000531733 CAMK2N2Q96S95 79 aa12.82□□□□□ -0.36
FDFT1-220ENST00000531733 OPRPNQ99935 248 aaPredicted RBP12.82□□□□□ -0.36
FDFT1-220ENST00000531733 TMEM191AQ9H0A3 160 aa12.82□□□□□ -0.36
FDFT1-220ENST00000531733 APOMO95445 188 aa12.81□□□□□ -0.36
FDFT1-220ENST00000531733 CT83Q5H943 113 aa12.81□□□□□ -0.36
FDFT1-220ENST00000531733 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
FDFT1-220ENST00000531733 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 HIGD1CA8MV81 97 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 C1orf196B1AJZ1 125 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 MT-ND6P03923 174 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 CEBPGP53567 150 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 RPL18AQ02543 176 aaKnown RBP12.8□□□□□ -0.36
FDFT1-220ENST00000531733 C5orf38Q86SI9 138 aa12.8□□□□□ -0.36
FDFT1-220ENST00000531733 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
FDFT1-220ENST00000531733 C1orf137Q5JT78 98 aa12.79□□□□□ -0.36
FDFT1-220ENST00000531733 Q6ZUT4 128 aa12.79□□□□□ -0.36
FDFT1-220ENST00000531733 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
FDFT1-220ENST00000531733 BORCS7Q96B45 105 aa12.79□□□□□ -0.36
FDFT1-220ENST00000531733 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
FDFT1-220ENST00000531733 PRR26Q8N8Z3 221 aa12.78□□□□□ -0.36
FDFT1-220ENST00000531733 NRACQ8N912 160 aa12.78□□□□□ -0.36
FDFT1-220ENST00000531733 TSKUQ8WUA8 353 aa12.78□□□□□ -0.36
FDFT1-220ENST00000531733 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
FDFT1-220ENST00000531733 C2orf48Q96LS8 159 aa12.77□□□□□ -0.37
FDFT1-220ENST00000531733 CSDC2Q9Y534 153 aaKnown RBP12.77□□□□□ -0.37
FDFT1-220ENST00000531733 VCYO14598 125 aa12.76□□□□□ -0.37
FDFT1-220ENST00000531733 FCER1GP30273 86 aa12.76□□□□□ -0.37
FDFT1-220ENST00000531733 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
FDFT1-220ENST00000531733 FAM168BA1KXE4 195 aa12.75□□□□□ -0.37
FDFT1-220ENST00000531733 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
FDFT1-220ENST00000531733 MUC2Q02817 5179 aa12.74□□□□□ -0.37
FDFT1-220ENST00000531733 ALKAL2Q6UX46 152 aa12.74□□□□□ -0.37
FDFT1-220ENST00000531733 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
FDFT1-220ENST00000531733 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
FDFT1-220ENST00000531733 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
FDFT1-220ENST00000531733 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
FDFT1-220ENST00000531733 C10orf25Q5T742 122 aa12.72□□□□□ -0.37
FDFT1-220ENST00000531733 SMIM7Q9BQ49 75 aa12.72□□□□□ -0.37
FDFT1-220ENST00000531733 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
FDFT1-220ENST00000531733 V9GYV3 84 aa12.71□□□□□ -0.37
FDFT1-220ENST00000531733 RPL39P62891 51 aaKnown RBP12.7□□□□□ -0.38
FDFT1-220ENST00000531733 KIR2DL4Q99706 377 aa12.7□□□□□ -0.38
FDFT1-220ENST00000531733 BLOC1S1P78537 153 aa12.69□□□□□ -0.38
FDFT1-220ENST00000531733 MRPL51Q4U2R6 128 aaKnown RBP12.69□□□□□ -0.38
FDFT1-220ENST00000531733 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
FDFT1-220ENST00000531733 TIMM21Q9BVV7 248 aa12.69□□□□□ -0.38
FDFT1-220ENST00000531733 RIGQ13278 110 aa12.68□□□□□ -0.38
FDFT1-220ENST00000531733 OR10D4PQ8NGN7 298 aa12.68□□□□□ -0.38
FDFT1-220ENST00000531733 ORAOV1Q8WV07 137 aa12.68□□□□□ -0.38
FDFT1-220ENST00000531733 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
FDFT1-220ENST00000531733 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
FDFT1-220ENST00000531733 A0A087WZ39 114 aa12.67□□□□□ -0.38
FDFT1-220ENST00000531733 ZNF727A8MUV8 499 aa12.67□□□□□ -0.38
FDFT1-220ENST00000531733 H0Y9J4 135 aa12.67□□□□□ -0.38
FDFT1-220ENST00000531733 UNQ6190/PRO20217Q6UXQ8 127 aa12.67□□□□□ -0.38
FDFT1-220ENST00000531733 IGHV3OR16-9A0A0B4J2B5 98 aa12.66□□□□□ -0.38
FDFT1-220ENST00000531733 KRTAP1-4P0C5Y4 121 aa12.66□□□□□ -0.38
FDFT1-220ENST00000531733 SMAGPQ0VAQ4 97 aa12.66□□□□□ -0.38
FDFT1-220ENST00000531733 FAM19A5Q7Z5A7 132 aaPredicted RBP12.66□□□□□ -0.38
FDFT1-220ENST00000531733 EIF5A2Q9GZV4 153 aaKnown RBP12.66□□□□□ -0.38
FDFT1-220ENST00000531733 C6orf48Q9UBA6 75 aa12.66□□□□□ -0.38
FDFT1-220ENST00000531733 PPP1R17O96001 155 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms