RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 LINC01620Q4KN68 170 aa11.21□□□□□ -0.61
CAPRIN1-210ENST00000531668 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
CAPRIN1-210ENST00000531668 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
CAPRIN1-210ENST00000531668 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-210ENST00000531668 RPL39P62891 51 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-210ENST00000531668 MRPL52Q86TS9 123 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-210ENST00000531668 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
CAPRIN1-210ENST00000531668 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
CAPRIN1-210ENST00000531668 XCL1P47992 114 aa11.18□□□□□ -0.62
CAPRIN1-210ENST00000531668 HAMPP81172 84 aa11.18□□□□□ -0.62
CAPRIN1-210ENST00000531668 SS18Q15532 418 aa11.18□□□□□ -0.62
CAPRIN1-210ENST00000531668 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
CAPRIN1-210ENST00000531668 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
CAPRIN1-210ENST00000531668 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
CAPRIN1-210ENST00000531668 SNAPINO95295 136 aa11.17□□□□□ -0.62
CAPRIN1-210ENST00000531668 PRSS1P07477 247 aa11.17□□□□□ -0.62
CAPRIN1-210ENST00000531668 SVBPQ8N300 66 aa11.17□□□□□ -0.62
CAPRIN1-210ENST00000531668 CCL25O15444 150 aa11.16□□□□□ -0.62
CAPRIN1-210ENST00000531668 Q6ZUT4 128 aa11.16□□□□□ -0.62
CAPRIN1-210ENST00000531668 DNAH11Q96DT5 4516 aa11.16□□□□□ -0.62
CAPRIN1-210ENST00000531668 TRAV13-1A0A0B4J241 112 aa11.15□□□□□ -0.62
CAPRIN1-210ENST00000531668 Q8N8P6 123 aa11.15□□□□□ -0.62
CAPRIN1-210ENST00000531668 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-210ENST00000531668 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
CAPRIN1-210ENST00000531668 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
CAPRIN1-210ENST00000531668 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-210ENST00000531668 DYNC1H1Q14204 4646 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 PRSS47A8MTI9 375 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 IFI27P40305 119 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 XGP55808 180 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 COX19Q49B96 90 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
CAPRIN1-210ENST00000531668 FOXI1Q12951 378 aa11.11□□□□□ -0.63
CAPRIN1-210ENST00000531668 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
CAPRIN1-210ENST00000531668 C1orf196B1AJZ1 125 aa11.1□□□□□ -0.63
CAPRIN1-210ENST00000531668 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-210ENST00000531668 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
CAPRIN1-210ENST00000531668 SMR3BP02814 79 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 MT-ND6P03923 174 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 MALP21145 153 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 CD164L2Q6UWJ8 174 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 CYSLTR1Q9Y271 337 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
CAPRIN1-210ENST00000531668 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
CAPRIN1-210ENST00000531668 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
CAPRIN1-210ENST00000531668 ALKBH7Q9BT30 221 aaPredicted RBP11.08□□□□□ -0.64
CAPRIN1-210ENST00000531668 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-210ENST00000531668 LINC00526Q96FQ7 95 aa11.07□□□□□ -0.64
CAPRIN1-210ENST00000531668 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
CAPRIN1-210ENST00000531668 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-210ENST00000531668 C5orf38Q86SI9 138 aa11.06□□□□□ -0.64
CAPRIN1-210ENST00000531668 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 COX7A2LO14548 114 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 SLPIP03973 132 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 Q8N1X5 172 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 TMEM141Q96I45 108 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 KRTAP4-5Q9BYR2 181 aa11.05□□□□□ -0.64
CAPRIN1-210ENST00000531668 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 IGLV4-3A0A075B6K6 122 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 K7EMI3 77 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 Q6ZN92 141 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 FA2HQ7L5A8 372 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 SMCO4Q9NRQ5 59 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
CAPRIN1-210ENST00000531668 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 G0S2P27469 103 aa11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
CAPRIN1-210ENST00000531668 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 CBLN2Q8IUK8 224 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 VCX2Q9H322 139 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 DNAH5Q8TE73 4624 aa11.02□□□□□ -0.65
CAPRIN1-210ENST00000531668 Q6ZSA8 131 aa11.01□□□□□ -0.65
CAPRIN1-210ENST00000531668 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
CAPRIN1-210ENST00000531668 APOMO95445 188 aa11□□□□□ -0.65
CAPRIN1-210ENST00000531668 SCGB3A1Q96QR1 104 aa11□□□□□ -0.65
CAPRIN1-210ENST00000531668 SDIM1Q6ZPB5 146 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms