RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	RNASE13	Q5GAN3	156 aa	Known RBP	11.95	□□□□□ -0.5
CTSB-222	ENST00000531551	SPANXA1	Q9NS26	97 aa		11.95	□□□□□ -0.5
CTSB-222	ENST00000531551	NBDY	A0A0U1RRE5	68 aa		11.95	□□□□□ -0.5
CTSB-222	ENST00000531551	LCE6A	A0A183	80 aa		11.95	□□□□□ -0.5
CTSB-222	ENST00000531551	LINC00269	Q8N2A0	174 aa		11.95	□□□□□ -0.5
CTSB-222	ENST00000531551	HYDIN	Q4G0P3	5121 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	PDZD11	Q5EBL8	140 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551		Q6ZUT4	128 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	C10orf126	Q8N4M7	172 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	UBE2W	Q96B02	151 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	TIMM21	Q9BVV7	248 aa		11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	TMA7	Q9Y2S6	64 aa	Known RBP	11.94	□□□□□ -0.5
CTSB-222	ENST00000531551	ZNF664	Q8N3J9	261 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	CDC42SE2	Q9NRR3	84 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	CSDC2	Q9Y534	153 aa	Known RBP	11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	CRP	P02741	224 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	TTC32	Q5I0X7	151 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	COA6	Q5JTJ3	125 aa	Known RBP	11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	ERAS	Q7Z444	233 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	KRTAP1-5	Q9BYS1	174 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	PYGO1	Q9Y3Y4	419 aa		11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.93	□□□□□ -0.5
CTSB-222	ENST00000531551	LINC01549	A6NIU2	74 aa		11.92	□□□□□ -0.5
CTSB-222	ENST00000531551	IGIP	A6NJ69	53 aa		11.92	□□□□□ -0.5
CTSB-222	ENST00000531551		Q9HAA7	133 aa		11.92	□□□□□ -0.5
CTSB-222	ENST00000531551	IGLV4-3	A0A075B6K6	122 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551	FABP4	P15090	132 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551	REG3A	Q06141	175 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551		Q6ZN92	141 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551	TMEM141	Q96I45	108 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551	TIMM17A	Q99595	171 aa		11.91	□□□□□ -0.5
CTSB-222	ENST00000531551	IBA57-AS1	B1ANH7	110 aa		11.9	□□□□□ -0.5
CTSB-222	ENST00000531551	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.9	□□□□□ -0.5
CTSB-222	ENST00000531551		K7EP13	123 aa		11.9	□□□□□ -0.5
CTSB-222	ENST00000531551	LEPROTL1	O95214	131 aa		11.9	□□□□□ -0.5
CTSB-222	ENST00000531551	ZC2HC1B	Q5TFG8	222 aa		11.9	□□□□□ -0.5
CTSB-222	ENST00000531551	MRPS36	P82909	103 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-222	ENST00000531551	ENHO	Q6UWT2	76 aa		11.89	□□□□□ -0.51
CTSB-222	ENST00000531551	FAM104A	Q969W3	186 aa		11.89	□□□□□ -0.51
CTSB-222	ENST00000531551	VCX2	Q9H322	139 aa		11.89	□□□□□ -0.51
CTSB-222	ENST00000531551	TEX43	Q6ZNM6	134 aa		11.89	□□□□□ -0.51
CTSB-222	ENST00000531551	ATP5L	O75964	103 aa		11.88	□□□□□ -0.51
CTSB-222	ENST00000531551	SNRPE	P62304	92 aa	Known RBP	11.88	□□□□□ -0.51
CTSB-222	ENST00000531551	LINC00173	Q6ZV60	143 aa		11.88	□□□□□ -0.51
CTSB-222	ENST00000531551	DNAH6	Q9C0G6	4158 aa		11.88	□□□□□ -0.51
CTSB-222	ENST00000531551	IGLV10-54	A0A075B6I4	117 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	TRAV13-1	A0A0B4J241	112 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	PAPPA-AS1	Q5QFB9	102 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	PRR34	Q9NV39	138 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	TRAV8-3	A0A0A6YYJ7	113 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	IFITM10	A6NMD0	228 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	BAALC	Q8WXS3	180 aa		11.87	□□□□□ -0.51
CTSB-222	ENST00000531551	DNAH2	Q9P225	4427 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	NPS	P0C0P6	89 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	S100A2	P29034	98 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551		Q6ZR54	194 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	IFI27L1	Q96BM0	104 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	C2orf88	Q9BSF0	95 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	HSPB8	Q9UJY1	196 aa		11.86	□□□□□ -0.51
CTSB-222	ENST00000531551	IGKV2D-24	A0A075B6R9	120 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551		H0Y8G0	127 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	PRSS1	P07477	247 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	MIA	Q16674	131 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	LINC00959	A0A1B0GUT2	108 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	HIST3H2BB	Q8N257	126 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	DNAH10	Q8IVF4	4471 aa		11.85	□□□□□ -0.51
CTSB-222	ENST00000531551	AMELX	Q99217	191 aa		11.84	□□□□□ -0.51
CTSB-222	ENST00000531551	C1orf43	Q9BWL3	253 aa		11.84	□□□□□ -0.51
CTSB-222	ENST00000531551	RYR2	Q92736	4967 aa		11.84	□□□□□ -0.51
CTSB-222	ENST00000531551	SS18	Q15532	418 aa		11.83	□□□□□ -0.52
CTSB-222	ENST00000531551	PRSS29P	A6NIE9	313 aa		11.83	□□□□□ -0.52
CTSB-222	ENST00000531551	PMVK	Q15126	192 aa		11.83	□□□□□ -0.52
CTSB-222	ENST00000531551	C5orf52	A6NGY3	159 aa		11.82	□□□□□ -0.52
CTSB-222	ENST00000531551	XCL1	P47992	114 aa		11.82	□□□□□ -0.52
CTSB-222	ENST00000531551	C6orf223	Q8N319	242 aa		11.82	□□□□□ -0.52
CTSB-222	ENST00000531551	CST9L	Q9H4G1	147 aa		11.82	□□□□□ -0.52
CTSB-222	ENST00000531551	TRAV8-4	A0A0B4J246	113 aa		11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	CCL25	O15444	150 aa		11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	C1orf134	Q5TEV5	83 aa		11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	RMI2	Q96E14	147 aa		11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	MAP1LC3C	Q9BXW4	147 aa		11.81	□□□□□ -0.52
CTSB-222	ENST00000531551	PSCA	O43653	123 aa		11.8	□□□□□ -0.52
CTSB-222	ENST00000531551	UBE2D1	P51668	147 aa		11.8	□□□□□ -0.52
CTSB-222	ENST00000531551	NFE4	Q86UQ8	179 aa		11.8	□□□□□ -0.52
CTSB-222	ENST00000531551	HIST1H2BL	Q99880	126 aa		11.79	□□□□□ -0.52
CTSB-222	ENST00000531551	GAGE12H	A6NDE8	117 aa		11.78	□□□□□ -0.52
CTSB-222	ENST00000531551	TM2D2	Q9BX73	214 aa		11.78	□□□□□ -0.52
CTSB-222	ENST00000531551	PACRG	Q96M98	296 aa	Predicted RBP	11.78	□□□□□ -0.52
CTSB-222	ENST00000531551		A0A0J9YXV3	536 aa		11.77	□□□□□ -0.53
CTSB-222	ENST00000531551	KRTDAP	P60985	99 aa		11.77	□□□□□ -0.53
CTSB-222	ENST00000531551	LINC00242	Q5T6M2	205 aa		11.77	□□□□□ -0.53
CTSB-222	ENST00000531551	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.77	□□□□□ -0.53
CTSB-222	ENST00000531551	COX11	Q9Y6N1	276 aa		11.77	□□□□□ -0.53
CTSB-222	ENST00000531551	GEMIN7	Q9H840	131 aa	Known RBP	11.76	□□□□□ -0.53
CTSB-222	ENST00000531551	RYR3	Q15413	4870 aa		11.76	□□□□□ -0.53
CTSB-222	ENST00000531551	TRAV12-1	A0A0B4J245	112 aa		11.75	□□□□□ -0.53
CTSB-222	ENST00000531551	C3orf79	P0CE67	100 aa		11.75	□□□□□ -0.53
CTSB-222	ENST00000531551	COX6A2	Q02221	97 aa		11.75	□□□□□ -0.53
CTSB-222	ENST00000531551	CD164L2	Q6UWJ8	174 aa		11.75	□□□□□ -0.53

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