RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
CTNND1-227ENST00000530748 WFDC10AQ9H1F0 79 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 COL6A6A6NMZ7 2263 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 USP17L23D6RBM5 183 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 MT-ATP8P03928 68 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 Q6ZS46 218 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 C11orf21Q9P2W6 132 aa6.21□□□□□ -1.41
CTNND1-227ENST00000530748 WFDC10BQ8IUB3 73 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 V9GYY9 64 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 ARFGEF3Q5TH69 2177 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 A0A096LNI7 61 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 Q8N976 141 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
CTNND1-227ENST00000530748 CHD3Q12873 2000 aaKnown RBP6.21□□□□□ -1.42
CTNND1-227ENST00000530748 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 M0R2N4 97 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 UQCRQO14949 82 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 A0A0J9YWU9 116 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 A8MZ25 164 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 UBE2D2P62837 147 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
CTNND1-227ENST00000530748 LRP4O75096 1905 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 Q8IZM0 81 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 ACACAQ13085 2346 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 IGLV2-18A0A075B6J9 118 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 CCKP06307 115 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 C10orf142B7Z368 130 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 NANOS2P60321 138 aaKnown RBP6.19□□□□□ -1.42
CTNND1-227ENST00000530748 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 ABCA1O95477 2261 aa6.19□□□□□ -1.42
CTNND1-227ENST00000530748 PLAC8L1A1L4L8 177 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
CTNND1-227ENST00000530748 CRIP2P52943 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-227ENST00000530748 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 ZNF407Q9C0G0 2248 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 MRPS12O15235 138 aaKnown RBP6.18□□□□□ -1.42
CTNND1-227ENST00000530748 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-227ENST00000530748 ATRXP46100 2492 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 C3orf84H3BNL1 204 aa6.18□□□□□ -1.42
CTNND1-227ENST00000530748 C2orf91Q6ZV80 131 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 LST1O00453 97 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 CDSNQ15517 529 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 COL5A1P20908 1838 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-227ENST00000530748 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 CNFNQ9BYD5 112 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 PTPRSQ13332 1948 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 NDUFC2-KCTD14E9PQ53 114 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 IGHV4-30-4P0DP06 118 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 C20orf197Q8N268 126 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
CTNND1-227ENST00000530748 ZNF73O43830 326 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-227ENST00000530748 EDN2P20800 178 aa6.16□□□□□ -1.42
CTNND1-227ENST00000530748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-227ENST00000530748 ATG2AQ2TAZ0 1938 aa6.16□□□□□ -1.42
CTNND1-227ENST00000530748 PRM2P04554 102 aa6.16□□□□□ -1.42
CTNND1-227ENST00000530748 LINC00526Q96FQ7 95 aa6.16□□□□□ -1.42
CTNND1-227ENST00000530748 MPLKIPQ8TAP9 179 aa6.15□□□□□ -1.42
CTNND1-227ENST00000530748 Q6ZQY7 126 aa6.15□□□□□ -1.43
CTNND1-227ENST00000530748 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.43
CTNND1-227ENST00000530748 NDUFC1O43677 76 aa6.15□□□□□ -1.43
CTNND1-227ENST00000530748 AVPP01185 164 aa6.15□□□□□ -1.43
CTNND1-227ENST00000530748 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 CNOT1A5YKK6 2376 aaKnown RBP6.14□□□□□ -1.43
CTNND1-227ENST00000530748 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 BRI3O95415 125 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
CTNND1-227ENST00000530748 CREBBPQ92793 2442 aa6.13□□□□□ -1.43
CTNND1-227ENST00000530748 CYSRT1A8MQ03 144 aa6.13□□□□□ -1.43
CTNND1-227ENST00000530748 ZNF580Q9UK33 172 aa6.13□□□□□ -1.43
CTNND1-227ENST00000530748 POLEQ07864 2286 aa6.13□□□□□ -1.43
CTNND1-227ENST00000530748 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 F8WDY8 70 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 IGLV1-51P01701 117 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 M0QXV9 152 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 Q6JHZ5 121 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 CPAMD8Q8IZJ3 1885 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 FAM240AA0A1B0GVK7 77 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 SMR3AQ99954 134 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 WFDC13Q8IUB5 93 aa6.12□□□□□ -1.43
CTNND1-227ENST00000530748 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms