RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 BAALC-AS2P0C853 105 aa13.22□□□□□ -0.29
RPL38-205ENST00000530646 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
RPL38-205ENST00000530646 TRACP01848 142 aa13.21□□□□□ -0.29
RPL38-205ENST00000530646 Q5XG85 94 aa13.21□□□□□ -0.29
RPL38-205ENST00000530646 F5H768 121 aa13.2□□□□□ -0.3
RPL38-205ENST00000530646 NDUFA1O15239 70 aa13.2□□□□□ -0.3
RPL38-205ENST00000530646 DSCR8Q96T75 97 aa13.2□□□□□ -0.3
RPL38-205ENST00000530646 IGKV3-20P01619 116 aa13.2□□□□□ -0.3
RPL38-205ENST00000530646 FBN2P35556 2912 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 ATOX1O00244 68 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 IGHV3OR16-10A0A075B7F0 116 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 PROK1P58294 105 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 HRCT1Q6UXD1 115 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 UPK3BQ9BT76 320 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 CDKN2A-AS1Q9UH64 79 aa13.19□□□□□ -0.3
RPL38-205ENST00000530646 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
RPL38-205ENST00000530646 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
RPL38-205ENST00000530646 FAM218AQ96MZ4 157 aa13.18□□□□□ -0.3
RPL38-205ENST00000530646 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
RPL38-205ENST00000530646 TMEM258P61165 79 aa13.17□□□□□ -0.3
RPL38-205ENST00000530646 SOSTDC1Q6X4U4 206 aa13.17□□□□□ -0.3
RPL38-205ENST00000530646 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
RPL38-205ENST00000530646 CHCHD7Q9BUK0 85 aa13.17□□□□□ -0.3
RPL38-205ENST00000530646 Q9UF83 564 aa13.17□□□□□ -0.3
RPL38-205ENST00000530646 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
RPL38-205ENST00000530646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.16□□□□□ -0.3
RPL38-205ENST00000530646 MOB4Q9Y3A3 225 aa13.16□□□□□ -0.3
RPL38-205ENST00000530646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
RPL38-205ENST00000530646 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
RPL38-205ENST00000530646 ZNF625Q96I27 306 aaPredicted RBP13.15□□□□□ -0.3
RPL38-205ENST00000530646 CHD6Q8TD26 2715 aa13.15□□□□□ -0.3
RPL38-205ENST00000530646 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
RPL38-205ENST00000530646 TRAV13-1A0A0B4J241 112 aa13.15□□□□□ -0.3
RPL38-205ENST00000530646 FAM222AQ5U5X8 452 aa13.15□□□□□ -0.3
RPL38-205ENST00000530646 NBPF19A0A087WUL8 3843 aa13.14□□□□□ -0.31
RPL38-205ENST00000530646 RS1O15537 224 aa13.14□□□□□ -0.31
RPL38-205ENST00000530646 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
RPL38-205ENST00000530646 RPL18AQ02543 176 aaKnown RBP13.14□□□□□ -0.31
RPL38-205ENST00000530646 SPINK13Q1W4C9 94 aa13.14□□□□□ -0.31
RPL38-205ENST00000530646 Q9H8V8 135 aa13.14□□□□□ -0.31
RPL38-205ENST00000530646 UBR5O95071 2799 aaPredicted RBP13.14□□□□□ -0.31
RPL38-205ENST00000530646 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
RPL38-205ENST00000530646 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 ZANQ9Y493 2812 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 RNF152Q8N8N0 203 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
RPL38-205ENST00000530646 IGLV5-45A0A087WSX0 123 aa13.12□□□□□ -0.31
RPL38-205ENST00000530646 BPESC1Q9GZL8 116 aa13.12□□□□□ -0.31
RPL38-205ENST00000530646 COX6A2Q02221 97 aa13.12□□□□□ -0.31
RPL38-205ENST00000530646 Q9HAA7 133 aa13.12□□□□□ -0.31
RPL38-205ENST00000530646 MALP21145 153 aa13.1□□□□□ -0.31
RPL38-205ENST00000530646 Q6ZSN1 163 aa13.1□□□□□ -0.31
RPL38-205ENST00000530646 SERP2Q8N6R1 65 aa13.1□□□□□ -0.31
RPL38-205ENST00000530646 A0A087WVE0 104 aa13.09□□□□□ -0.31
RPL38-205ENST00000530646 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
RPL38-205ENST00000530646 KNCNA6PVL3 124 aa13.08□□□□□ -0.32
RPL38-205ENST00000530646 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
RPL38-205ENST00000530646 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
RPL38-205ENST00000530646 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
RPL38-205ENST00000530646 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
RPL38-205ENST00000530646 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 H3BUA1 57 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 K7EMT4 169 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 HOXD3P31249 432 aaPredicted RBP13.06□□□□□ -0.32
RPL38-205ENST00000530646 ZNF843Q8N446 348 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
RPL38-205ENST00000530646 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
RPL38-205ENST00000530646 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
RPL38-205ENST00000530646 LINC01561Q8N1V8 128 aa13.05□□□□□ -0.32
RPL38-205ENST00000530646 HTN1P15515 57 aa13.05□□□□□ -0.32
RPL38-205ENST00000530646 TENM4Q6N022 2769 aa13.05□□□□□ -0.32
RPL38-205ENST00000530646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.329e-10■■■■■ 29.1
RPL38-205ENST00000530646 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 DNAL4O96015 105 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 LMO4P61968 165 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 Q6JHZ5 121 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 C14orf132Q9NPU4 83 aa13.04□□□□□ -0.32
RPL38-205ENST00000530646 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
RPL38-205ENST00000530646 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 SMIM1B2RUZ4 78 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 LY6EQ16553 131 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 CCL19Q99731 98 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 DOPEY2Q9Y3R5 2298 aa13.03□□□□□ -0.32
RPL38-205ENST00000530646 PRM2P04554 102 aa13.02□□□□□ -0.32
RPL38-205ENST00000530646 ZNF415Q09FC8 603 aa13.02□□□□□ -0.32
RPL38-205ENST00000530646 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.32
RPL38-205ENST00000530646 MRAPQ8TCY5 172 aa13.02□□□□□ -0.32
RPL38-205ENST00000530646 C10orf105Q8TEF2 133 aa13.02□□□□□ -0.32
RPL38-205ENST00000530646 K7EQG2 157 aa13.02□□□□□ -0.33
RPL38-205ENST00000530646 RPL28P46779 137 aaKnown RBP13.02□□□□□ -0.33
RPL38-205ENST00000530646 FHL2Q14192 279 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms