RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
ITGB1-218ENST00000528877 IGLV4-60A0A075B6I1 120 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 HIGD1CA8MV81 97 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 SMR3BP02814 79 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-218ENST00000528877 PRSS1P07477 247 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-218ENST00000528877 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-218ENST00000528877 LINC01620Q4KN68 170 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 CLPSL2Q6UWE3 100 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 ISOC2Q96AB3 205 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
ITGB1-218ENST00000528877 MRAP2Q96G30 205 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 SMDT1Q9H4I9 107 aa4.56□□□□□ -1.68
ITGB1-218ENST00000528877 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 UBE2L6O14933 153 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 APCSP02743 223 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 CEBPGP53567 150 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 CIRBPQ14011 172 aaKnown RBP4.55□□□□□ -1.68
ITGB1-218ENST00000528877 C9orf163Q8N9P6 203 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 CIRBP-AS1Q8TBR5 109 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 BORCS7Q96B45 105 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 V9GYV3 84 aa4.55□□□□□ -1.68
ITGB1-218ENST00000528877 I3L3M4 83 aa4.54□□□□□ -1.68
ITGB1-218ENST00000528877 TSHBP01222 138 aa4.54□□□□□ -1.68
ITGB1-218ENST00000528877 ESDP10768 282 aa4.54□□□□□ -1.68
ITGB1-218ENST00000528877 RPL23P62829 140 aaKnown RBP4.54□□□□□ -1.68
ITGB1-218ENST00000528877 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
ITGB1-218ENST00000528877 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
ITGB1-218ENST00000528877 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
ITGB1-218ENST00000528877 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
ITGB1-218ENST00000528877 IGLV10-54A0A075B6I4 117 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 A0A1B0GW15 77 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 C9JQL5 133 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 PPP1R17O96001 155 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 FGF6P10767 208 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 RAB4AP20338 218 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 POLR2KP53803 58 aaKnown RBP4.53□□□□□ -1.68
ITGB1-218ENST00000528877 TMEM241Q24JQ0 296 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 C15orf56Q8N910 161 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 ST20Q9HBF5 79 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 NAT8BQ9UHF3 227 aa4.53□□□□□ -1.68
ITGB1-218ENST00000528877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 GAS8-AS1O95177 125 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 RPS10P46783 165 aaKnown RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 RPL32P62910 135 aaKnown RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 RIGQ13278 110 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 SDIM1Q6ZPB5 146 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 NRACQ8N912 160 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 DEFB104AQ8WTQ1 72 aa4.52□□□□□ -1.69
ITGB1-218ENST00000528877 CHCHD10Q8WYQ3 142 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-218ENST00000528877 IGHV3-64A0A075B6Q5 118 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 hDV102S1A0JD36 115 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 C7orf77A4D0Y5 90 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-218ENST00000528877 PPP1R2P9O14990 202 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 PEA15Q15121 130 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 ADIRFQ15847 76 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 CFAP161Q6P656 301 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 OR5A1Q8NGJ0 315 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 MPLKIPQ8TAP9 179 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 SPACA4Q8TDM5 124 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 TMEM242Q9NWH2 141 aa4.51□□□□□ -1.69
ITGB1-218ENST00000528877 CSDC2Q9Y534 153 aaKnown RBP4.51□□□□□ -1.69
ITGB1-218ENST00000528877 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 TRBV24-1A0A075B6N3 115 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 LINC00862A6NCI5 91 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 PANO1I0J062 215 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 VCYO14598 125 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 TCAPO15273 167 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 PMCHP20382 165 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 FAM104BQ5XKR9 115 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 BTF3L4Q96K17 158 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 C20orf78Q9BR46 151 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
ITGB1-218ENST00000528877 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 PHOX2AO14813 284 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 CCL25O15444 150 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 S100A8P05109 93 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 RPL37AP61513 92 aaKnown RBP4.49□□□□□ -1.69
ITGB1-218ENST00000528877 HBBP68871 147 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 MRPL51Q4U2R6 128 aaKnown RBP4.49□□□□□ -1.69
ITGB1-218ENST00000528877 RNASEKQ6P5S7 137 aaKnown RBP4.49□□□□□ -1.69
ITGB1-218ENST00000528877 ATP5L2Q7Z4Y8 100 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
ITGB1-218ENST00000528877 TIMM21Q9BVV7 248 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms