RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SSTP61278 116 aa4.79□□□□□ -1.64
USP48-212ENST00000527823 UBE2G1P62253 170 aa4.79□□□□□ -1.64
USP48-212ENST00000527823 CYCSP99999 105 aaKnown RBP4.79□□□□□ -1.64
USP48-212ENST00000527823 MED28Q9H204 178 aa4.79□□□□□ -1.64
USP48-212ENST00000527823 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
USP48-212ENST00000527823 SYCNQ0VAF6 134 aa4.78□□□□□ -1.64
USP48-212ENST00000527823 C9orf116Q5BN46 136 aaPredicted RBP4.78□□□□□ -1.64
USP48-212ENST00000527823 ACTR3CQ9C0K3 210 aaPredicted RBP4.78□□□□□ -1.64
USP48-212ENST00000527823 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 AKR1C3P42330 323 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 XCL1P47992 114 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 UBE2D1P51668 147 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 COTL1Q14019 142 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 RASL11AQ6T310 242 aa4.77□□□□□ -1.65
USP48-212ENST00000527823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 CTXND1A0A1B0GTU2 59 aa4.76□□□□□ -1.65
USP48-212ENST00000527823 IGKV2-29A2NJV5 120 aaPredicted RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 CCL25O15444 150 aa4.76□□□□□ -1.65
USP48-212ENST00000527823 MBP02144 154 aa4.76□□□□□ -1.65
USP48-212ENST00000527823 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 SERF2P84101 59 aa4.76□□□□□ -1.65
USP48-212ENST00000527823 MEF2BQ02080 365 aaPredicted RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 PNRC1Q12796 327 aaPredicted RBP4.76□□□□□ -1.65
USP48-212ENST00000527823 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
USP48-212ENST00000527823 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 APOMO95445 188 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 FGF6P10767 208 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
USP48-212ENST00000527823 NUP35Q8NFH5 326 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 CCDC32Q9BV29 185 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 NKX6-2Q9C056 277 aaPredicted RBP4.75□□□□□ -1.65
USP48-212ENST00000527823 TNFSF18Q9UNG2 199 aa4.75□□□□□ -1.65
USP48-212ENST00000527823 IGLV4-69A0A075B6H9 119 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 LINC00959A0A1B0GUT2 108 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 TSPAN13O95857 204 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 TSHBP01222 138 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 IGLC6P0CF74 106 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 NTF3P20783 257 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 AMMECR1LQ6DCA0 310 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 RNASEKQ6P5S7 137 aaKnown RBP4.74□□□□□ -1.65
USP48-212ENST00000527823 OR5A1Q8NGJ0 315 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 ENKURQ8TC29 256 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 TCEAL7Q9BRU2 100 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 NIT2Q9NQR4 276 aa4.74□□□□□ -1.65
USP48-212ENST00000527823 A0A087WZ39 114 aa4.73□□□□□ -1.65
USP48-212ENST00000527823 MAP1LC3B2A6NCE7 125 aa4.73□□□□□ -1.65
USP48-212ENST00000527823 EIF5AP63241 154 aaKnown RBP4.73□□□□□ -1.65
USP48-212ENST00000527823 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
USP48-212ENST00000527823 TPPP3Q9BW30 176 aa4.73□□□□□ -1.65
USP48-212ENST00000527823 MAP1LC3BQ9GZQ8 125 aa4.73□□□□□ -1.65
USP48-212ENST00000527823 SMIM1B2RUZ4 78 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 SSNA1O43805 119 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 APCSP02743 223 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 FHITP49789 147 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 CAMK2N2Q96S95 79 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 RETNLBQ9BQ08 111 aa4.72□□□□□ -1.65
USP48-212ENST00000527823 RPP21Q9H633 154 aaKnown RBP4.72□□□□□ -1.65
USP48-212ENST00000527823 A0A087X002 238 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 INMT-MINDY4F8WBC2 141 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 BCL2L11O43521 198 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
USP48-212ENST00000527823 DEFA1P59665 94 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 RPL7L1Q6DKI1 246 aaKnown RBP4.71□□□□□ -1.66
USP48-212ENST00000527823 CD164L2Q6UWJ8 174 aa4.71□□□□□ -1.66
USP48-212ENST00000527823 FAM19A5Q7Z5A7 132 aaPredicted RBP4.71□□□□□ -1.66
USP48-212ENST00000527823 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
USP48-212ENST00000527823 H7C423 109 aa4.7□□□□□ -1.66
USP48-212ENST00000527823 NCR2O95944 276 aa4.7□□□□□ -1.66
USP48-212ENST00000527823 BAGE2Q86Y30 109 aa4.7□□□□□ -1.66
USP48-212ENST00000527823 GATD1Q8NB37 220 aa4.7□□□□□ -1.66
USP48-212ENST00000527823 OPRPNQ99935 248 aaPredicted RBP4.7□□□□□ -1.66
USP48-212ENST00000527823 CARHSP1Q9Y2V2 147 aaKnown RBP4.7□□□□□ -1.66
USP48-212ENST00000527823 TRGC1P0CF51 173 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 CFC1P0CG37 223 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 IFITM3Q01628 133 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 C2orf48Q96LS8 159 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 MARVELD1Q9BSK0 173 aa4.69□□□□□ -1.66
USP48-212ENST00000527823 C19orf71A6NCJ1 209 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 M0QXV9 152 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 COX7A2LO14548 114 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 S100A9P06702 114 aaKnown RBP4.68□□□□□ -1.66
USP48-212ENST00000527823 ESDP10768 282 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 CTRLP40313 264 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 SPAG11BQ08648 103 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 SS18Q15532 418 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 AKR1C8PQ5T2L2 129 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
USP48-212ENST00000527823 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 TSKUQ8WUA8 353 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 BTF3L4Q96K17 158 aa4.68□□□□□ -1.66
USP48-212ENST00000527823 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
USP48-212ENST00000527823 UBE2BP63146 152 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms