RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 MRPL52Q86TS9 123 aaKnown RBP8.78□□□□□ -1
CAPN1-209ENST00000527469 hDV102S1A0JD36 115 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 SS18Q15532 418 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 ZNF664Q8N3J9 261 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 CLRN3Q8NCR9 226 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
CAPN1-209ENST00000527469 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
CAPN1-209ENST00000527469 RYR1P21817 5038 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 XCL1P47992 114 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 LINC01620Q4KN68 170 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 KRTAP26-1Q6PEX3 210 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 MAP1LC3AQ9H492 121 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
CAPN1-209ENST00000527469 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 PRSS1P07477 247 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 RHEBQ15382 184 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 NDUFA5Q16718 116 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 Q8N1X5 172 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 RPS10P5Q9NQ39 176 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
CAPN1-209ENST00000527469 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
CAPN1-209ENST00000527469 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
CAPN1-209ENST00000527469 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
CAPN1-209ENST00000527469 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
CAPN1-209ENST00000527469 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
CAPN1-209ENST00000527469 CCL25O15444 150 aa8.73□□□□□ -1.01
CAPN1-209ENST00000527469 XGP55808 180 aa8.73□□□□□ -1.01
CAPN1-209ENST00000527469 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
CAPN1-209ENST00000527469 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
CAPN1-209ENST00000527469 APOC3P02656 99 aa8.72□□□□□ -1.01
CAPN1-209ENST00000527469 RPL39P62891 51 aaKnown RBP8.72□□□□□ -1.01
CAPN1-209ENST00000527469 HAMPP81172 84 aa8.72□□□□□ -1.01
CAPN1-209ENST00000527469 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
CAPN1-209ENST00000527469 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
CAPN1-209ENST00000527469 TRAV13-1A0A0B4J241 112 aa8.71□□□□□ -1.02
CAPN1-209ENST00000527469 C1orf196B1AJZ1 125 aa8.71□□□□□ -1.02
CAPN1-209ENST00000527469 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
CAPN1-209ENST00000527469 Q6ZUT4 128 aa8.71□□□□□ -1.02
CAPN1-209ENST00000527469 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
CAPN1-209ENST00000527469 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
CAPN1-209ENST00000527469 MALP21145 153 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
CAPN1-209ENST00000527469 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 COX19Q49B96 90 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 CD164L2Q6UWJ8 174 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 SVBPQ8N300 66 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 Q8N8P6 123 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
CAPN1-209ENST00000527469 SNAPINO95295 136 aa8.69□□□□□ -1.02
CAPN1-209ENST00000527469 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
CAPN1-209ENST00000527469 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
CAPN1-209ENST00000527469 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
CAPN1-209ENST00000527469 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
CAPN1-209ENST00000527469 GNB1LQ9BYB4 327 aa8.69□□□□□ -1.02
CAPN1-209ENST00000527469 NXT2Q9NPJ8 142 aaKnown RBP8.69□□□□□ -1.02
CAPN1-209ENST00000527469 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
CAPN1-209ENST00000527469 HSPG2P98160 4391 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 IFITM10A6NMD0 228 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 PRSS47A8MTI9 375 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 COX7A2LO14548 114 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 MT-ND6P03923 174 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 Q6ZSA8 131 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
CAPN1-209ENST00000527469 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-209ENST00000527469 K7EMI3 77 aa8.67□□□□□ -1.02
CAPN1-209ENST00000527469 G0S2P27469 103 aa8.67□□□□□ -1.02
CAPN1-209ENST00000527469 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
CAPN1-209ENST00000527469 Q5VSD8 79 aa8.67□□□□□ -1.02
CAPN1-209ENST00000527469 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
CAPN1-209ENST00000527469 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
CAPN1-209ENST00000527469 FABP9Q0Z7S8 132 aa8.66□□□□□ -1.02
CAPN1-209ENST00000527469 Q6ZN92 141 aa8.66□□□□□ -1.02
CAPN1-209ENST00000527469 PRSS3P2Q8NHM4 247 aa8.66□□□□□ -1.02
CAPN1-209ENST00000527469 DPH3Q96FX2 82 aa8.66□□□□□ -1.02
CAPN1-209ENST00000527469 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-209ENST00000527469 APOMO95445 188 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
CAPN1-209ENST00000527469 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.02
CAPN1-209ENST00000527469 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
CAPN1-209ENST00000527469 C5orf38Q86SI9 138 aa8.64□□□□□ -1.03
CAPN1-209ENST00000527469 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
CAPN1-209ENST00000527469 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
CAPN1-209ENST00000527469 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
CAPN1-209ENST00000527469 VCX2Q9H322 139 aa8.63□□□□□ -1.03
CAPN1-209ENST00000527469 SMCO4Q9NRQ5 59 aa8.63□□□□□ -1.03
CAPN1-209ENST00000527469 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
CAPN1-209ENST00000527469 IGLV4-3A0A075B6K6 122 aa8.62□□□□□ -1.03
CAPN1-209ENST00000527469 SLPIP03973 132 aa8.62□□□□□ -1.03
CAPN1-209ENST00000527469 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms