RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TNCP24821 2201 aa2.57□□□□□ -2
CLNS1A-209ENST00000527299 GOLGB1Q14789 3259 aaKnown RBP2.57□□□□□ -2
CLNS1A-209ENST00000527299 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 IGHV4OR15-8A0A075B7B6 117 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 A0A087WW49 117 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 TRAV10A0A0B4J240 114 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 IGHV7-4-1A0A0J9YVY3 117 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 PSPHP1O15172 72 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 PSCAO43653 123 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 SAA1P0DJI8 122 aaPredicted RBP2.56□□□□□ -2
CLNS1A-209ENST00000527299 S100A4P26447 101 aaKnown RBP2.56□□□□□ -2
CLNS1A-209ENST00000527299 CCL4L1Q8NHW4 92 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 TMEM167AQ8TBQ9 72 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 ZNF625Q96I27 306 aaPredicted RBP2.56□□□□□ -2
CLNS1A-209ENST00000527299 RP1P56715 2156 aa2.56□□□□□ -2
CLNS1A-209ENST00000527299 TRBV6-8A0A0A6YYG3 113 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 IGHV3-43A0A0B4J1X8 118 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 C10orf142B7Z368 130 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 HCG22E2RYF7 251 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 NDUFA1O15239 70 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 IGHV3-43DP0DP04 118 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 POLR2KP53803 58 aaKnown RBP2.55□□□□□ -2
CLNS1A-209ENST00000527299 RPL39P5Q59GN2 51 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 C9orf129Q5T035 196 aaKnown RBP2.55□□□□□ -2
CLNS1A-209ENST00000527299 HCP5Q6MZN7 132 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 Q75L30 129 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 WFDC9Q8NEX5 89 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 LINC00308Q8TCZ7 52 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 ITLN2Q8WWU7 325 aaPredicted RBP2.55□□□□□ -2
CLNS1A-209ENST00000527299 DOCK10Q96BY6 2186 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 LINC00167Q96N53 147 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 MED13Q9UHV7 2174 aa2.55□□□□□ -2
CLNS1A-209ENST00000527299 IGHV3OR16-9A0A0B4J2B5 98 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 TRBV6-5A0A0K0K1A5 114 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 LCE6AA0A183 80 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 A0A1W2PNU3 283 aaPredicted RBP2.54□□□□□ -2
CLNS1A-209ENST00000527299 DEFB108AA8MXU0 73 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 C3orf84H3BNL1 204 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 IGHV3-9P01782 118 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 LINC01547P58512 204 aaPredicted RBP2.54□□□□□ -2
CLNS1A-209ENST00000527299 LYZP61626 148 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 WT1-ASQ06250 92 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
CLNS1A-209ENST00000527299 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 MAPK1IP1LQ8NDC0 245 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 RPL39LQ96EH5 51 aaKnown RBP2.54□□□□□ -2
CLNS1A-209ENST00000527299 DEFB126Q9BYW3 111 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 Q9HAA7 133 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 ORMDL1Q9P0S3 153 aa2.54□□□□□ -2
CLNS1A-209ENST00000527299 COL27A1Q8IZC6 1860 aaPredicted RBP2.54□□□□□ -2
CLNS1A-209ENST00000527299 CADP27708 2225 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 IGLV3-12A0A075B6K2 115 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 IGKV2-40A0A087WW87 121 aaPredicted RBP2.53□□□□□ -2
CLNS1A-209ENST00000527299 LOC110117498A0A087WWA1 95 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 TRAV21A0A0B4J279 112 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 A0A0J9YXV3 536 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 LOC101927531A0A1B0GV80 90 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 A8MU10 97 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 CHKB-CPT1BH3BT56 60 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 K7EQG2 157 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 NCR3O14931 201 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 IGKV2D-40P01614 121 aaPredicted RBP2.53□□□□□ -2
CLNS1A-209ENST00000527299 IGKV1-16P04430 117 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 PRM2P04554 102 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 SAA2P0DJI9 122 aaPredicted RBP2.53□□□□□ -2
CLNS1A-209ENST00000527299 CGB3P0DN86 165 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 CGB7P0DN87 165 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 PDE6GP18545 87 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 CD52P31358 61 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 NDPQ00604 133 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 C11orf72Q8NBR9 251 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 SPTSSBQ8NFR3 76 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 OCR1Q9BZK8 76 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 SVILO95425 2214 aa2.53□□□□□ -2
CLNS1A-209ENST00000527299 IGLV3-9A0A075B6K5 115 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 IGLV4-3A0A075B6K6 122 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 IGKV2-29A2NJV5 120 aaPredicted RBP2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 BPY2O14599 106 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 LY6HO94772 140 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 CRPP02741 224 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 ELOF1P60002 83 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 RPL39P62891 51 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 PRR3P79522 188 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 FBXL19-AS1Q494R0 122 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 C9orf116Q5BN46 136 aaPredicted RBP2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 NOTCH2NLQ7Z3S9 236 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 CDC42SE2Q9NRR3 84 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 Q9Y3F1 56 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 PCNTO95613 3336 aa2.52□□□□□ -2.01
CLNS1A-209ENST00000527299 NAV3Q8IVL0 2385 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 IGHV3-64A0A075B6Q5 118 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 IGLV5-45A0A087WSX0 123 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 C19orf84I3L1E1 186 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 IGKV1-17P01599 117 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 MOBPQ13875 183 aa2.51□□□□□ -2.01
CLNS1A-209ENST00000527299 DEFB110Q30KQ9 67 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms