RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 IGLC7A0M8Q6 106 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 UBE2D3P61077 147 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 UBE2D2P62837 147 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 SMIM4Q8WVI0 70 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 ZNF609O15014 1411 aa1.47□□□□□ -2.17
ATM-208ENST00000525537 ZNF236Q9UL36 1845 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 LINC00032P0C843 101 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 UBA52P62987 128 aaKnown RBP1.46□□□□□ -2.18
ATM-208ENST00000525537 SEC11AP67812 179 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 TMEM170BQ5T4T1 132 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 BAGE2Q86Y30 109 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 CADP27708 2225 aa1.46□□□□□ -2.18
ATM-208ENST00000525537 UQCR11O14957 56 aa1.45□□□□□ -2.18
ATM-208ENST00000525537 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
ATM-208ENST00000525537 LINC01558Q9Y6Z2 57 aa1.45□□□□□ -2.18
ATM-208ENST00000525537 KIF21AQ7Z4S6 1674 aa1.45□□□□□ -2.18
ATM-208ENST00000525537 TEX14Q8IWB6 1497 aa1.44□□□□□ -2.18
ATM-208ENST00000525537 PRO1854Q9UHT4 67 aa1.44□□□□□ -2.18
ATM-208ENST00000525537 ARHGEF5Q12774 1597 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 COX6CP09669 75 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 PMCHL2Q9BQD1 86 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 AKAP12Q02952 1782 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 GAPVD1Q14C86 1478 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 SHANK2Q9UPX8 1470 aa1.43□□□□□ -2.18
ATM-208ENST00000525537 KDM5AP29375 1690 aaKnown RBP1.42□□□□□ -2.18
ATM-208ENST00000525537 PIN1P1O15428 100 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 SFT2D2O95562 160 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 APOC3P02656 99 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 COX17Q14061 63 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 VAMP8Q9BV40 100 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 FYCO1Q9BQS8 1478 aa1.42□□□□□ -2.18
ATM-208ENST00000525537 NMBP08949 121 aa1.41□□□□□ -2.18
ATM-208ENST00000525537 NPVFQ9HCQ7 196 aa1.41□□□□□ -2.18
ATM-208ENST00000525537 ANKRD36BQ8N2N9 1353 aa1.41□□□□□ -2.18
ATM-208ENST00000525537 DIP2CQ9Y2E4 1556 aa1.41□□□□□ -2.18
ATM-208ENST00000525537 HMGXB3Q12766 1538 aa1.4□□□□□ -2.18
ATM-208ENST00000525537 TRAPPC2P0DI81 140 aa1.4□□□□□ -2.19
ATM-208ENST00000525537 TRAPPC2BP0DI82 140 aa1.4□□□□□ -2.19
ATM-208ENST00000525537 SPINK7P58062 85 aa1.4□□□□□ -2.19
ATM-208ENST00000525537 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
ATM-208ENST00000525537 SBF2Q86WG5 1849 aa1.4□□□□□ -2.19
ATM-208ENST00000525537 TOP2BQ02880 1626 aa1.4□□□□□ -2.19
ATM-208ENST00000525537 ARL2-SNX15V9GYD0 113 aa1.39□□□□□ -2.19
ATM-208ENST00000525537 LRRC37A2A6NM11 1700 aa1.39□□□□□ -2.19
ATM-208ENST00000525537 ANKRD26Q9UPS8 1709 aa1.39□□□□□ -2.19
ATM-208ENST00000525537 PRDM15P57071 1507 aaPredicted RBP1.39□□□□□ -2.19
ATM-208ENST00000525537 EHBP1L1Q8N3D4 1523 aa1.39□□□□□ -2.19
ATM-208ENST00000525537 UBE2DNLQ8IWF7 75 aa1.38□□□□□ -2.19
ATM-208ENST00000525537 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
ATM-208ENST00000525537 C10orf142B7Z368 130 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 ATOX1O00244 68 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 NDUFC1O43677 76 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 IGLC1P0CG04 106 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 SPATA8Q6RVD6 105 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 FAM223AQ8IWN6 122 aa1.37□□□□□ -2.19
ATM-208ENST00000525537 WNK3Q9BYP7 1800 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 GNG2P59768 71 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 Q9H521 79 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 FAIMQ9NVQ4 179 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 ASXL3Q9C0F0 2248 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 FBN2P35556 2912 aa1.36□□□□□ -2.19
ATM-208ENST00000525537 COL4A6Q14031 1691 aa1.35□□□□□ -2.19
ATM-208ENST00000525537 A0A0G2JND7 137 aa1.35□□□□□ -2.19
ATM-208ENST00000525537 MGPP08493 103 aa1.35□□□□□ -2.19
ATM-208ENST00000525537 PLXNB2O15031 1838 aa1.35□□□□□ -2.19
ATM-208ENST00000525537 UNC13BO14795 1591 aa1.34□□□□□ -2.19
ATM-208ENST00000525537 KDM3BQ7LBC6 1761 aa1.34□□□□□ -2.19
ATM-208ENST00000525537 NSD3Q9BZ95 1437 aa1.34□□□□□ -2.19
ATM-208ENST00000525537 MEGF8Q7Z7M0 2845 aa1.34□□□□□ -2.19
ATM-208ENST00000525537 CACFD1Q9UGQ2 172 aa1.34□□□□□ -2.19
ATM-208ENST00000525537 MAGI1Q96QZ7 1491 aaPredicted RBP1.34□□□□□ -2.19
ATM-208ENST00000525537 BTAF1O14981 1849 aa1.33□□□□□ -2.2
ATM-208ENST00000525537 RAPGEF6Q8TEU7 1601 aa1.33□□□□□ -2.2
ATM-208ENST00000525537 M0R3E3 92 aa1.33□□□□□ -2.2
ATM-208ENST00000525537 FAUP35544 74 aaKnown RBP1.33□□□□□ -2.2
ATM-208ENST00000525537 SERP2Q8N6R1 65 aa1.33□□□□□ -2.2
ATM-208ENST00000525537 ADGRL2O95490 1459 aa1.32□□□□□ -2.2
ATM-208ENST00000525537 FAM223BA6NKX1 122 aa1.32□□□□□ -2.2
ATM-208ENST00000525537 V9GYS6 101 aa1.32□□□□□ -2.2
ATM-208ENST00000525537 TTC37Q6PGP7 1564 aa1.32□□□□□ -2.2
ATM-208ENST00000525537 CACNA1CQ13936 2221 aa1.32□□□□□ -2.2
ATM-208ENST00000525537 TROQ12816 1431 aaPredicted RBP1.32□□□□□ -2.2
ATM-208ENST00000525537 MLH3Q9UHC1 1453 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 H7BZZ5 65 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 SAA2P0DJI9 122 aaPredicted RBP1.31□□□□□ -2.2
ATM-208ENST00000525537 SSBP3-AS1Q7Z2R9 100 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 SPRR4Q96PI1 79 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 TRGV9Q99603 122 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 SCN7AQ01118 1682 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 MYO7BQ6PIF6 2116 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 PLEKHH2Q8IVE3 1493 aa1.31□□□□□ -2.2
ATM-208ENST00000525537 TRBV7-7A0A0K0K1E9 115 aa1.3□□□□□ -2.2
ATM-208ENST00000525537 ZNF815PA8K554 130 aa1.3□□□□□ -2.2
ATM-208ENST00000525537 ASIPP42127 132 aa1.3□□□□□ -2.2
ATM-208ENST00000525537 HAMPP81172 84 aa1.3□□□□□ -2.2
ATM-208ENST00000525537 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
ATM-208ENST00000525537 CACNA1HO95180 2353 aa1.29□□□□□ -2.2
ATM-208ENST00000525537 PLAC8Q9NZF1 115 aa1.29□□□□□ -2.2
ATM-208ENST00000525537 NOTCH1P46531 2555 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms