RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HPGDSO60760 199 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 NBEAP1P0C6P0 100 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 S100A11P31949 105 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 CAMLGP49069 296 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 TAS2R45P59539 299 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 HBG1P69891 147 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 HBG2P69892 147 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 BAXQ07812 192 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 SMUG1Q53HV7 270 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 TEX261Q6UWH6 196 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 IZUMO2Q6UXV1 221 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 Q6ZQT7 251 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 FAM19A3Q7Z5A8 133 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 LINC01551Q86U37 167 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 C5orf17Q8NAS9 161 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 OR5A1Q8NGJ0 315 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 FXYD5Q96DB9 178 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 FAM167A-AS1Q96KT0 104 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 PACRGQ96M98 296 aaPredicted RBP0.75□□□□□ -2.29
CD44-212ENST00000524922 TMEM243Q9BU79 118 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 CNFNQ9BYD5 112 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 ARL6Q9H0F7 186 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 RBKSQ9H477 322 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 SMDT1Q9H4I9 107 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 SCP2D1Q9UJQ7 156 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 ZFP30Q9Y2G7 519 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 TIMM9Q9Y5J7 89 aa0.75□□□□□ -2.29
CD44-212ENST00000524922 ZNF706Q9Y5V0 76 aaPredicted RBP0.75□□□□□ -2.29
CD44-212ENST00000524922 IGKV2D-26A0A0A0MRZ7 120 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 MUC21A0A0G2JKD1 596 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 RAB19A4D1S5 217 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 FAM24AA6NFZ4 105 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 FABP5P3A8MUU1 101 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 DISC1C4P0D8 188 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 NDUFC2-KCTD14E9PQ53 114 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 TMEM262E9PQX1 116 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 M0QXV9 152 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 PMP2P02689 132 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 BCL2P10415 239 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 S100A4P26447 101 aaKnown RBP0.74□□□□□ -2.29
CD44-212ENST00000524922 FAUP35544 74 aaKnown RBP0.74□□□□□ -2.29
CD44-212ENST00000524922 TGFBR1P36897 503 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SULT1A2P50226 295 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 TMBIM6P55061 237 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SS18Q15532 418 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 KRTAP13-2Q52LG2 175 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 LINC00483Q53H64 154 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 KHDC3LQ587J8 217 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SPANXN2Q5MJ10 180 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 C10orf91Q5T1B1 145 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 LYZL1Q6UWQ5 148 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 NTM-AS1Q6ZSK4 140 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SSBP3-AS1Q7Z2R9 100 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 LYZL2Q7Z4W2 148 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 CMTM2Q8TAZ6 248 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SMIM4Q8WVI0 70 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 CHCHD10Q8WYQ3 142 aaPredicted RBP0.74□□□□□ -2.29
CD44-212ENST00000524922 HIST1H2BAQ96A08 127 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SMIM12Q96EX1 92 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 AP1S3Q96PC3 154 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 MGST2Q99735 147 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 DERL1Q9BUN8 251 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 SLC25A2Q9BXI2 301 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 TREM1Q9NP99 234 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 UQCC1Q9NVA1 299 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 TXNL4BQ9NX01 149 aaKnown RBP0.74□□□□□ -2.29
CD44-212ENST00000524922 TNFSF18Q9UNG2 199 aa0.74□□□□□ -2.29
CD44-212ENST00000524922 A0A0J9YXY3 114 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 TRBV6-5A0A0K0K1A5 114 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 A0A1W2PRE2 83 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 C20orf202A1L168 122 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 SMCO3A2RU48 225 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 C17orf112F2Z3M2 114 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 M0QY20 66 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 COX7A2LO14548 114 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 UBE2L6O14933 153 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 NDUFA1O15239 70 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 GNRH2O43555 120 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 RAB3DO95716 219 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 MT2AP02795 61 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 CD3DP04234 171 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 TCRAP04437 139 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 S100A9P06702 114 aaKnown RBP0.73□□□□□ -2.29
CD44-212ENST00000524922 GNAO1P09471 354 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 AKAIN1P0CW23 69 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 TPT1P13693 172 aaKnown RBP0.73□□□□□ -2.29
CD44-212ENST00000524922 FGF7P21781 194 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 SDC2P34741 201 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 CXCL5P42830 114 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 SULT1A1P50225 295 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 AQP4P55087 323 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 AP3S2P59780 193 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 RPS20P60866 119 aaKnown RBP0.73□□□□□ -2.29
CD44-212ENST00000524922 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
CD44-212ENST00000524922 CD164Q04900 197 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 ERCC8Q13216 396 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 COTL1Q14019 142 aa0.73□□□□□ -2.29
CD44-212ENST00000524922 LGALSLQ3ZCW2 172 aaPredicted RBP0.73□□□□□ -2.29
CD44-212ENST00000524922 SPANXN5Q5MJ07 72 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms