RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
PKP3-202ENST00000524646 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
PKP3-202ENST00000524646 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
PKP3-202ENST00000524646 NTN5Q8WTR8 489 aaPredicted RBP6.39□□□□□ -1.39
PKP3-202ENST00000524646 COPS9Q8WXC6 57 aa6.39□□□□□ -1.39
PKP3-202ENST00000524646 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
PKP3-202ENST00000524646 TMEM101Q96IK0 257 aa6.39□□□□□ -1.39
PKP3-202ENST00000524646 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
PKP3-202ENST00000524646 ASH1LQ9NR48 2969 aaKnown RBP6.39□□□□□ -1.39
PKP3-202ENST00000524646 A0A1W2PRX2 142 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 CIDEAO60543 219 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 LINC00694P0DN24 101 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 CMC4P56277 68 aaPredicted RBP6.38□□□□□ -1.39
PKP3-202ENST00000524646 NPC2P61916 151 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 CIRBPQ14011 172 aaKnown RBP6.38□□□□□ -1.39
PKP3-202ENST00000524646 HIST2H2BDQ6DRA6 164 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 Q6ZTI0 123 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
PKP3-202ENST00000524646 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 Q9H8V8 135 aa6.38□□□□□ -1.39
PKP3-202ENST00000524646 USP9YO00507 2555 aaPredicted RBP6.37□□□□□ -1.39
PKP3-202ENST00000524646 FAM208BQ5VWN6 2430 aa6.37□□□□□ -1.39
PKP3-202ENST00000524646 LST1O00453 97 aa6.37□□□□□ -1.39
PKP3-202ENST00000524646 COX6A2Q02221 97 aa6.37□□□□□ -1.39
PKP3-202ENST00000524646 TMEM243Q9BU79 118 aa6.37□□□□□ -1.39
PKP3-202ENST00000524646 PPDPFQ9H3Y8 114 aa6.37□□□□□ -1.39
PKP3-202ENST00000524646 FLNCQ14315 2725 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 GAGE12JA6NER3 117 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 F5H768 121 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 CKS1BP61024 79 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 HERV-K104P63124 156 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 GAGE4Q13068 117 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 GAGE5Q13069 117 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 CLEC2BQ92478 149 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
PKP3-202ENST00000524646 CITED1Q99966 193 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 FAM110AQ9BQ89 295 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 USP24Q9UPU5 2620 aa6.36□□□□□ -1.39
PKP3-202ENST00000524646 MYO18BQ8IUG5 2567 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 TRAV8-4A0A0B4J246 113 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 H7C423 109 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 DAND5Q8N907 189 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 CITED2Q99967 270 aaPredicted RBP6.35□□□□□ -1.39
PKP3-202ENST00000524646 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 PTPN13Q12923 2485 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 ZFHX3Q15911 3703 aa6.35□□□□□ -1.39
PKP3-202ENST00000524646 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 POLQO75417 2590 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 WNK1Q9H4A3 2382 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 TRAV13-1A0A0B4J241 112 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 UBE2L6O14933 153 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
PKP3-202ENST00000524646 GIG44P09565 113 aaPredicted RBP6.34□□□□□ -1.39
PKP3-202ENST00000524646 MEIG1Q5JSS6 88 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 PRIMA1Q86XR5 153 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 C11orf44Q8N8P7 122 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 WFDC11Q8NEX6 87 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 C16orf95Q9H693 158 aa6.34□□□□□ -1.39
PKP3-202ENST00000524646 NOP10Q9NPE3 64 aaKnown RBP6.34□□□□□ -1.39
PKP3-202ENST00000524646 NAV2Q8IVL1 2488 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 COX7A2LO14548 114 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 IGLV1-51P01701 117 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 DEFB121Q5J5C9 76 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 FAM222AQ5U5X8 452 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 ZNF462Q96JM2 2506 aa6.33□□□□□ -1.4
PKP3-202ENST00000524646 FBN2P35556 2912 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 GAGE7O76087 117 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 NDUFA7O95182 113 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 GAGE12FP0CL80 117 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 GAGE12GP0CL81 117 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 GAGE12IP0CL82 117 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 MRPL23Q16540 153 aaKnown RBP6.32□□□□□ -1.4
PKP3-202ENST00000524646 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 WFDC10AQ9H1F0 79 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 C19orf73Q9NVV2 129 aa6.32□□□□□ -1.4
PKP3-202ENST00000524646 UBR5O95071 2799 aaPredicted RBP6.31□□□□□ -1.4
PKP3-202ENST00000524646 MYO9AB2RTY4 2548 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 LRRK2Q5S007 2527 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 TRGV2A0A075B6R0 118 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 SNCGO76070 127 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 RPL35AP18077 110 aaKnown RBP6.31□□□□□ -1.4
PKP3-202ENST00000524646 Q6Q795 121 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 SHISA2Q6UWI4 295 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 LINC01006Q8NI28 216 aa6.31□□□□□ -1.4
PKP3-202ENST00000524646 SVEP1Q4LDE5 3571 aa6.3□□□□□ -1.4
PKP3-202ENST00000524646 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
PKP3-202ENST00000524646 LOC100131303A0A0U1RQF7 123 aa6.3□□□□□ -1.4
PKP3-202ENST00000524646 CRPP02741 224 aa6.3□□□□□ -1.4
PKP3-202ENST00000524646 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
PKP3-202ENST00000524646 COX7B2Q8TF08 81 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms