RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 TIRAPP58753 221 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 SSTP61278 116 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 Q0VG73 95 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 RHOHQ15669 191 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 KIAA1644Q3SXP7 199 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 DGAT2L7PQ6IED9 249 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 AMN1Q8IY45 258 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 ZNF664Q8N3J9 261 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 C14orf178Q8N769 122 aaPredicted RBP2.4□□□□□ -2.03
NPM1-210ENST00000523339 FER1L6-AS1Q8NA97 138 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 RPL39LQ96EH5 51 aaKnown RBP2.4□□□□□ -2.03
NPM1-210ENST00000523339 CTDSP1Q9GZU7 261 aa2.4□□□□□ -2.03
NPM1-210ENST00000523339 IGHV3-64A0A075B6Q5 118 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 A0A087WWL8 130 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 A0A087WYN8 130 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 A0A096LNJ9 63 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 IGHV3-73A0A0B4J1V6 119 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 TRAV4A0A0B4J268 109 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 A8MWL6 223 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 USP17L23D6RBM5 183 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 K7EQM0 130 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 M0R381 172 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 RAB4AP20338 218 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 RAB5AP20339 215 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 NTF3P20783 257 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 KRTAP10-8P60410 259 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
NPM1-210ENST00000523339 IQCJQ1A5X6 159 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 MRPL51Q4U2R6 128 aaKnown RBP2.39□□□□□ -2.03
NPM1-210ENST00000523339 CFAP126Q5VTH2 177 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 FAM159AQ6UWV7 190 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 SVIPQ8NHG7 77 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 RASL10AQ92737 203 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 PTH2Q96A98 100 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 NDFIP1Q9BT67 221 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 TPPP3Q9BW30 176 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 GFRA4Q9GZZ7 299 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 SMCO4Q9NRQ5 59 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 NAT8BQ9UHF3 227 aa2.39□□□□□ -2.03
NPM1-210ENST00000523339 IGKV2D-30A0A075B6S6 120 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 IGKV2-24A0A0C4DH68 120 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 A0A1B0GUT8 65 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 hDV102S1A0JD36 115 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 GAGE12JA6NER3 117 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 M0R2P5 195 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 PPP1R2P9O14990 202 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BKO60814 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 NPYP01303 97 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 TRGC2P03986 189 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BJP06899 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 CHTF8P0CG12 524 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BOP23527 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BBP33778 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 CAMPP49913 170 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 UBE2D1P51668 147 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BDP58876 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BCP62807 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 GAGE1Q13065 139 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 GAGE4Q13068 117 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 GAGE5Q13069 117 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST2H2BEQ16778 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 MAJINQ3KP22 176 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.38□□□□□ -2.03
NPM1-210ENST00000523339 FAM104BQ5XKR9 115 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 ZFP82Q8N141 532 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 C15orf54Q8N8G6 183 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 SLC25A29Q8N8R3 303 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 ALKBH7Q9BT30 221 aaPredicted RBP2.38□□□□□ -2.03
NPM1-210ENST00000523339 SPXQ9BT56 116 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
NPM1-210ENST00000523339 TRAV9-1A0A075B6T8 112 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 TRBV6-4A0A1B0GX49 114 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 D6R8Y8 96 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 M0QY20 66 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 TRIAP1O43715 76 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 PRSS1P07477 247 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 TRGC1P0CF51 173 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 RPS20P60866 119 aaKnown RBP2.37□□□□□ -2.03
NPM1-210ENST00000523339 HBBP68871 147 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 ZNF876PQ49A33 203 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 Q6ZRP5 223 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 NTM-AS1Q6ZSK4 140 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 ATP5L2Q7Z4Y8 100 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 NEXN-AS1Q8NBZ9 246 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 BTF3L4Q96K17 158 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 GNB1LQ9BYB4 327 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 TMEM191AQ9H0A3 160 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 BIN3Q9NQY0 253 aa2.37□□□□□ -2.03
NPM1-210ENST00000523339 LINC01546A6NGU7 62 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 TSHBP01222 138 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 ANGP03950 147 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms