RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 NACAE9PAV3 2078 aa3.65□□□□□ -1.83
NPM1-207ENST00000521260 NOTCH4Q99466 2003 aa3.65□□□□□ -1.83
NPM1-207ENST00000521260 FER1L5A0AVI2 2057 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 IGHV3OR16-9A0A0B4J2B5 98 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 LCE6AA0A183 80 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 LOC101927531A0A1B0GV80 90 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 H0Y9J4 135 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 Q5VV11 94 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 KRTAP1-3Q8IUG1 177 aa3.64□□□□□ -1.83
NPM1-207ENST00000521260 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
NPM1-207ENST00000521260 SPAG17Q6Q759 2223 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 TRBV6-4A0A1B0GX49 114 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 PRAC2D3DTV9 90 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 MRGPRG-AS1Q2M3A8 158 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 XP32Q5T750 250 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 SCXQ7RTU7 201 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 NPBQ8NG41 125 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 ITLN2Q8WWU7 325 aaPredicted RBP3.63□□□□□ -1.83
NPM1-207ENST00000521260 WWC2-AS2Q96NR7 200 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 CDC42SE2Q9NRR3 84 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 CDKN2A-AS1Q9UH64 79 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 KLK9Q9UKQ9 250 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 MED12Q93074 2177 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 GON4LQ3T8J9 2241 aa3.63□□□□□ -1.83
NPM1-207ENST00000521260 USF3Q68DE3 2245 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 IGHV3-64DA0A0J9YX35 117 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 C3orf84H3BNL1 204 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 LINC00158P58513 81 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 KLK9Q2XQG4 91 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 ZFAND2AQ8N6M9 145 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 C11orf72Q8NBR9 251 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
NPM1-207ENST00000521260 INTS1Q8N201 2190 aaKnown RBP3.61□□□□□ -1.83
NPM1-207ENST00000521260 UNC13CQ8NB66 2214 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 K7EQD1 137 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 IGLV1-44P01699 117 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 IGHV1-8P0DP01 117 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 IGHV4-38-2P0DP08 117 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 LINC00313P59037 77 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 B9D2Q9BPU9 175 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 DOCK7Q96N67 2140 aa3.61□□□□□ -1.83
NPM1-207ENST00000521260 IGLV3-9A0A075B6K5 115 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 IGHV3-49A0A0A0MS15 119 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 ETDCA0A1B0GVM5 59 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 KLLNB2CW77 178 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 C10orf142B7Z368 130 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 TFF1P04155 84 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 COX7BP24311 80 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 ESPL1Q14674 2120 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
NPM1-207ENST00000521260 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
NPM1-207ENST00000521260 COX7B2Q8TF08 81 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 RETNLBQ9BQ08 111 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 KAAG1Q9UBP8 84 aa3.6□□□□□ -1.83
NPM1-207ENST00000521260 POLEQ07864 2286 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 IGKV2-28A0A075B6P5 120 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 K7EQG2 157 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 IGKV2D-28P01615 120 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 APELAP0DMC3 54 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 IGHV4-31P0DP07 118 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 IGHV1-2P23083 117 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 COX17Q14061 63 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 IGFL3Q6UXB1 125 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.59□□□□□ -1.83
NPM1-207ENST00000521260 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
NPM1-207ENST00000521260 PCNTO95613 3336 aa3.59□□□□□ -1.84
NPM1-207ENST00000521260 COL27A1Q8IZC6 1860 aaPredicted RBP3.58□□□□□ -1.84
NPM1-207ENST00000521260 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 CCL24O00175 119 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 IGLV1-47P01700 117 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 SLPIP03973 132 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 CCL18P55774 89 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 DEFB133Q30KQ1 61 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 FBXL19-AS1Q494R0 122 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
NPM1-207ENST00000521260 CHCHD7Q9BUK0 85 aa3.58□□□□□ -1.84
NPM1-207ENST00000521260 DIDO1Q9BTC0 2240 aaKnown RBP3.58□□□□□ -1.84
NPM1-207ENST00000521260 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 NDUFA4O00483 81 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 IGKV4-1P06312 121 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 CCL3L1P16619 93 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 PRRC2AP48634 2157 aaKnown RBP3.57□□□□□ -1.84
NPM1-207ENST00000521260 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 PRR9Q5T870 116 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 Q6ZTI0 123 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 DEFB108BQ8NET1 73 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 PRSS33Q8NF86 280 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 LINC00467Q9BRT7 94 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 TTTY12Q9BZ98 90 aa3.57□□□□□ -1.84
NPM1-207ENST00000521260 WFDC10AQ9H1F0 79 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms