RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 FOXI1Q12951 378 aa13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 SMDT1Q9H4I9 107 aa13.54□□□□□ -0.24
ARFGEF1-206ENST00000519436 PEA15Q15121 130 aa13.53□□□□□ -0.24
ARFGEF1-206ENST00000519436 ADIRFQ15847 76 aa13.53□□□□□ -0.24
ARFGEF1-206ENST00000519436 MRPL52Q86TS9 123 aaKnown RBP13.53□□□□□ -0.24
ARFGEF1-206ENST00000519436 CDC42SE2Q9NRR3 84 aa13.53□□□□□ -0.24
ARFGEF1-206ENST00000519436 LINC00959A0A1B0GUT2 108 aa13.52□□□□□ -0.25
ARFGEF1-206ENST00000519436 VCYO14598 125 aa13.52□□□□□ -0.25
ARFGEF1-206ENST00000519436 TMEM101Q96IK0 257 aa13.52□□□□□ -0.25
ARFGEF1-206ENST00000519436 BTF3L4Q96K17 158 aa13.52□□□□□ -0.25
ARFGEF1-206ENST00000519436 GVQW2A0A096LPI5 108 aaPredicted RBP13.51□□□□□ -0.25
ARFGEF1-206ENST00000519436 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-206ENST00000519436 HIGD2BQ4VC39 106 aa13.51□□□□□ -0.25
ARFGEF1-206ENST00000519436 FAM104BQ5XKR9 115 aa13.51□□□□□ -0.25
ARFGEF1-206ENST00000519436 PPP1R17O96001 155 aa13.5□□□□□ -0.25
ARFGEF1-206ENST00000519436 CHTF8P0CG12 524 aa13.5□□□□□ -0.25
ARFGEF1-206ENST00000519436 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-206ENST00000519436 MRPL51Q4U2R6 128 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-206ENST00000519436 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
ARFGEF1-206ENST00000519436 HNRNPA3P51991 378 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-206ENST00000519436 SPACA4Q8TDM5 124 aa13.49□□□□□ -0.25
ARFGEF1-206ENST00000519436 A0A087WYN8 130 aa13.48□□□□□ -0.25
ARFGEF1-206ENST00000519436 CCL25O15444 150 aa13.48□□□□□ -0.25
ARFGEF1-206ENST00000519436 XCL1P47992 114 aa13.48□□□□□ -0.25
ARFGEF1-206ENST00000519436 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
ARFGEF1-206ENST00000519436 COX6A2Q02221 97 aa13.47□□□□□ -0.25
ARFGEF1-206ENST00000519436 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 LINC00862A6NCI5 91 aa13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 OXTP01178 125 aa13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 CAMPP49913 170 aa13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 PRSS3P2Q8NHM4 247 aa13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
ARFGEF1-206ENST00000519436 A0A1B0GW15 77 aa13.45□□□□□ -0.26
ARFGEF1-206ENST00000519436 FCER1GP30273 86 aa13.45□□□□□ -0.26
ARFGEF1-206ENST00000519436 CD164L2Q6UWJ8 174 aa13.45□□□□□ -0.26
ARFGEF1-206ENST00000519436 PLAC8Q9NZF1 115 aa13.45□□□□□ -0.26
ARFGEF1-206ENST00000519436 UBE2D4Q9Y2X8 147 aa13.45□□□□□ -0.26
ARFGEF1-206ENST00000519436 PPP1R2P9O14990 202 aa13.44□□□□□ -0.26
ARFGEF1-206ENST00000519436 RPL32P62910 135 aaKnown RBP13.44□□□□□ -0.26
ARFGEF1-206ENST00000519436 SS18Q15532 418 aa13.44□□□□□ -0.26
ARFGEF1-206ENST00000519436 DPH3Q96FX2 82 aa13.44□□□□□ -0.26
ARFGEF1-206ENST00000519436 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
ARFGEF1-206ENST00000519436 IGHV1-58A0A0C4DH39 117 aa13.43□□□□□ -0.26
ARFGEF1-206ENST00000519436 A0A1B0GXF2 115 aa13.43□□□□□ -0.26
ARFGEF1-206ENST00000519436 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
ARFGEF1-206ENST00000519436 CKS2P33552 79 aa13.41□□□□□ -0.26
ARFGEF1-206ENST00000519436 LINC00526Q96FQ7 95 aa13.41□□□□□ -0.26
ARFGEF1-206ENST00000519436 TNFRSF6BO95407 300 aa13.4□□□□□ -0.26
ARFGEF1-206ENST00000519436 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
ARFGEF1-206ENST00000519436 TIMM21Q9BVV7 248 aa13.4□□□□□ -0.26
ARFGEF1-206ENST00000519436 C1orf196B1AJZ1 125 aa13.39□□□□□ -0.27
ARFGEF1-206ENST00000519436 HBBP68871 147 aa13.39□□□□□ -0.27
ARFGEF1-206ENST00000519436 FAM104AQ969W3 186 aa13.39□□□□□ -0.27
ARFGEF1-206ENST00000519436 RNASE13Q5GAN3 156 aaKnown RBP13.38□□□□□ -0.27
ARFGEF1-206ENST00000519436 A0A096LNI7 61 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 IGKV2-24A0A0C4DH68 120 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 D6R8Y8 96 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 F8W036 122 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 S100A8P05109 93 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 MAJINQ3KP22 176 aa13.37□□□□□ -0.27
ARFGEF1-206ENST00000519436 Q6ZUT4 128 aa13.36□□□□□ -0.27
ARFGEF1-206ENST00000519436 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
ARFGEF1-206ENST00000519436 PHOX2AO14813 284 aa13.35□□□□□ -0.27
ARFGEF1-206ENST00000519436 TCAPO15273 167 aa13.35□□□□□ -0.27
ARFGEF1-206ENST00000519436 NPYP01303 97 aa13.35□□□□□ -0.27
ARFGEF1-206ENST00000519436 TMEM18Q96B42 140 aa13.35□□□□□ -0.27
ARFGEF1-206ENST00000519436 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
ARFGEF1-206ENST00000519436 TRAV13-1A0A0B4J241 112 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 ZNF561-AS1K7EIQ3 104 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 PPBPP02775 128 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 ATP5L2Q7Z4Y8 100 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 STPG4Q8N801 248 aa13.34□□□□□ -0.27
ARFGEF1-206ENST00000519436 COX7A2LO14548 114 aa13.33□□□□□ -0.28
ARFGEF1-206ENST00000519436 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
ARFGEF1-206ENST00000519436 Q6ZRU5 148 aa13.32□□□□□ -0.28
ARFGEF1-206ENST00000519436 HMCN2Q8NDA2 5059 aa13.32□□□□□ -0.28
ARFGEF1-206ENST00000519436 MALP21145 153 aa13.31□□□□□ -0.28
ARFGEF1-206ENST00000519436 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
ARFGEF1-206ENST00000519436 C5orf38Q86SI9 138 aa13.31□□□□□ -0.28
ARFGEF1-206ENST00000519436 OPRPNQ99935 248 aaPredicted RBP13.31□□□□□ -0.28
ARFGEF1-206ENST00000519436 LINC00474Q9P2X8 69 aa13.31□□□□□ -0.28
ARFGEF1-206ENST00000519436 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
ARFGEF1-206ENST00000519436 ORMDL3Q8N138 153 aa13.3□□□□□ -0.28
ARFGEF1-206ENST00000519436 C7orf33Q8WU49 177 aa13.3□□□□□ -0.28
ARFGEF1-206ENST00000519436 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
ARFGEF1-206ENST00000519436 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
ARFGEF1-206ENST00000519436 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
ARFGEF1-206ENST00000519436 PNRC1Q12796 327 aaPredicted RBP13.29□□□□□ -0.28
ARFGEF1-206ENST00000519436 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
ARFGEF1-206ENST00000519436 PKIGQ9Y2B9 76 aa13.29□□□□□ -0.28
ARFGEF1-206ENST00000519436 C2orf48Q96LS8 159 aa13.28□□□□□ -0.28
ARFGEF1-206ENST00000519436 PRELID3AQ96N28 172 aa13.28□□□□□ -0.28
ARFGEF1-206ENST00000519436 IGHV3OR16-9A0A0B4J2B5 98 aa13.27□□□□□ -0.29
ARFGEF1-206ENST00000519436 ANAPC16Q96DE5 110 aa13.27□□□□□ -0.29
ARFGEF1-206ENST00000519436 PTTG1IPP53801 180 aa13.26□□□□□ -0.29
ARFGEF1-206ENST00000519436 RAB14P61106 215 aa13.26□□□□□ -0.29
ARFGEF1-206ENST00000519436 TNXBP22105 4242 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms