RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HMGN4O00479 90 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 ACYP2P14621 99 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 S100A10P60903 97 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 Q6ZRX8 168 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 SMIM11BQ8TCY0 68 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 FAM167A-AS1Q96KT0 104 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 MGST2Q99735 147 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 SNHG12Q9BXW3 62 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 PRDM15P57071 1507 aaPredicted RBP0.46□□□□□ -2.34
SQLE-202ENST00000518604 EHBP1L1Q8N3D4 1523 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 KDM5AP29375 1690 aaKnown RBP0.46□□□□□ -2.34
SQLE-202ENST00000518604 KIF21AQ7Z4S6 1674 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 TOP2BQ02880 1626 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 M0R135 149 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 S100A8P05109 93 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 SNCAP37840 140 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 SPAG11BQ08648 103 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 Q0VG73 95 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 SPAG11AQ6PDA7 123 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 MYOZ3Q8TDC0 251 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 TEX14Q8IWB6 1497 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 CACNA1CQ13936 2221 aa0.45□□□□□ -2.34
SQLE-202ENST00000518604 TCHHQ07283 1943 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 ADGRL2O95490 1459 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 GAPVD1Q14C86 1478 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 POLQO75417 2590 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 M0R143 59 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 GNG11P61952 73 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 BAGE3Q86Y29 109 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 DYNLRB1Q9NP97 96 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 V9GYH0 126 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 TROQ12816 1431 aaPredicted RBP0.44□□□□□ -2.34
SQLE-202ENST00000518604 ANKRD36BQ8N2N9 1353 aa0.44□□□□□ -2.34
SQLE-202ENST00000518604 PIEZO1Q92508 2521 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 TTC28Q96AY4 2481 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 MAGI1Q96QZ7 1491 aaPredicted RBP0.43□□□□□ -2.34
SQLE-202ENST00000518604 FYCO1Q9BQS8 1478 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 MYO7BQ6PIF6 2116 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 FAM208BQ5VWN6 2430 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 IGLC7A0M8Q6 106 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 F2Z2F3 143 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 CHKB-CPT1BH3BT56 60 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 LINC01558Q9Y6Z2 57 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 R4GMQ9 66 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 TTC37Q6PGP7 1564 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 BTAF1O14981 1849 aa0.43□□□□□ -2.34
SQLE-202ENST00000518604 ANKRD17O75179 2603 aaKnown RBP0.42□□□□□ -2.34
SQLE-202ENST00000518604 USP24Q9UPU5 2620 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 NSD3Q9BZ95 1437 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 F8VRH5 84 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 CFAP126Q5VTH2 177 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 PLXNB2O15031 1838 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 KDM3BQ7LBC6 1761 aa0.42□□□□□ -2.34
SQLE-202ENST00000518604 LRRC37A2A6NM11 1700 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 SBF2Q86WG5 1849 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 NAP1L6A6NFF2 107 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 GNGT2O14610 69 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 PKIAP61925 76 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 FAM223AQ8IWN6 122 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 SPRR4Q96PI1 79 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 PRR15LQ9BU68 103 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 PROK2Q9HC23 129 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 MANBALQ9NQG1 85 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 SCP2D1Q9UJQ7 156 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 LRP6O75581 1613 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 MARF1Q9Y4F3 1742 aaKnown RBP0.41□□□□□ -2.34
SQLE-202ENST00000518604 RAPGEF2Q9Y4G8 1499 aa0.41□□□□□ -2.34
SQLE-202ENST00000518604 UNC13BO14795 1591 aa0.4□□□□□ -2.34
SQLE-202ENST00000518604 CRYM-AS1A6NIL9 109 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 H7BZZ5 65 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 SFT2D2O95562 160 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 NMBP08949 121 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 GCHFRP30047 84 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 SEC11AP67812 179 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 SFTA2Q6UW10 78 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 BAGE2Q86Y30 109 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 PRO1854Q9UHT4 67 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 MON2Q7Z3U7 1717 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 NRXN1Q9ULB1 1477 aa0.4□□□□□ -2.35
SQLE-202ENST00000518604 RAPGEF6Q8TEU7 1601 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 NUP188Q5SRE5 1749 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 CTXND1A0A1B0GTU2 59 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 FAM223BA6NKX1 122 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 UQCR11O14957 56 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 IGLC1P0CG04 106 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 UBA52P62987 128 aaKnown RBP0.39□□□□□ -2.35
SQLE-202ENST00000518604 COL5A1-AS1Q5SY13 56 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 DPY30Q9C005 99 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 MLH3Q9UHC1 1453 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 KMT2DO14686 5537 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 F8P00451 2351 aa0.39□□□□□ -2.35
SQLE-202ENST00000518604 WNK3Q9BYP7 1800 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 ABCA12Q86UK0 2595 aa0.38□□□□□ -2.35
SQLE-202ENST00000518604 TRBV7-7A0A0K0K1E9 115 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms