RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ABCC5O15440 1437 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 AFDNP55196 1824 aaKnown RBP0.04□□□□□ -2.4
SKP1-203ENST00000517625 C9JAW5 83 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 DEGS1O15121 323 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 HLA-DRB4P13762 266 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 EMX2Q04743 252 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 ATP6V0E2Q8NHE4 81 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 SPRR2FQ96RM1 72 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 PRR15LQ9BU68 103 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 DNAJC15Q9Y5T4 150 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 HLA-DRB4X5D2U9 266 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 CCDC171Q6TFL3 1326 aa0.04□□□□□ -2.4
SKP1-203ENST00000517625 C1orf167Q5SNV9 1468 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 KDM5DQ9BY66 1539 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 TTC37Q6PGP7 1564 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 GNG14A0A1W2PPG7 69 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 SPINK1P00995 79 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 RBP4P02753 201 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 DBIP07108 87 aaKnown RBP0.03□□□□□ -2.4
SKP1-203ENST00000517625 SPCS2Q15005 226 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 OR8B8Q15620 311 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 Q5BKY6 102 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 TMEM244Q5VVB8 128 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 TCTE3Q8IZS6 198 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 ERG28Q9UKR5 140 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 SCN11AQ9UI33 1791 aa0.03□□□□□ -2.4
SKP1-203ENST00000517625 ATG2AQ2TAZ0 1938 aa0.03□□□□□ -2.41
SKP1-203ENST00000517625 MLH3Q9UHC1 1453 aa0.03□□□□□ -2.41
SKP1-203ENST00000517625 DNAH10Q8IVF4 4471 aa0.03□□□□□ -2.41
SKP1-203ENST00000517625 POLR1AO95602 1720 aaPredicted RBP0.02□□□□□ -2.41
SKP1-203ENST00000517625 LTN1O94822 1766 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 FER1L6Q2WGJ9 1857 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 TRAV17A0A0B4J275 112 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 RBAKDNA6NC62 111 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 F2Z2F3 143 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 CCDC179H3BU77 68 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 TNFSF15O95150 251 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 ELOF1P60002 83 aaKnown RBP0.02□□□□□ -2.41
SKP1-203ENST00000517625 Q5VSD8 79 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 ATP11AUNQ6ZP68 121 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 DYNLRB2Q8TF09 96 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 ABCA6Q8N139 1617 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 KIF21AQ7Z4S6 1674 aa0.02□□□□□ -2.41
SKP1-203ENST00000517625 FLGP20930 4061 aaPredicted RBP0.01□□□□□ -2.41
SKP1-203ENST00000517625 ZNF670-ZNF695F2Z2N8 137 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 MT-ND4LP03901 98 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 CCDC153Q494R4 210 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 OR2T2Q6IF00 324 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 BPESC1Q9GZL8 116 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 HIGD1AQ9Y241 93 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 ERVK-7P63135 1459 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 PLCH1Q4KWH8 1693 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 DLEC1Q9Y238 1755 aa0.01□□□□□ -2.41
SKP1-203ENST00000517625 A0A1B0GW64 132 aa0□□□□□ -2.41
SKP1-203ENST00000517625 H0YJX3 145 aa0□□□□□ -2.41
SKP1-203ENST00000517625 EPRSP07814 1512 aaKnown RBP0□□□□□ -2.41
SKP1-203ENST00000517625 CMPK1P30085 196 aa0□□□□□ -2.41
SKP1-203ENST00000517625 SPAG17Q6Q759 2223 aa0□□□□□ -2.41
SKP1-203ENST00000517625 TRPM7Q96QT4 1865 aa0□□□□□ -2.41
SKP1-203ENST00000517625 DNAH6Q9C0G6 4158 aa0□□□□□ -2.41
SKP1-203ENST00000517625 BANF2Q9H503 90 aa0□□□□□ -2.41
SKP1-203ENST00000517625 AKAP11Q9UKA4 1901 aa0□□□□□ -2.41
SKP1-203ENST00000517625 NOP16Q9Y3C1 178 aaKnown RBP0□□□□□ -2.41
SKP1-203ENST00000517625 VPS13BQ7Z7G8 4022 aa-0□□□□□ -2.41
SKP1-203ENST00000517625 C3P01024 1663 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 TOPAZ1Q8N9V7 1692 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 MAST1Q9Y2H9 1570 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 MAP3K1Q13233 1512 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 TCRBV3S1A0A5B6 114 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 M0R2P5 195 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 SLC25A6P12236 298 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 SSBP1Q04837 148 aaKnown RBP-0.01□□□□□ -2.41
SKP1-203ENST00000517625 MORN2Q502X0 79 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 TAC4Q86UU9 113 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 SNX29P2Q8IUI4 249 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 NINQ8N4C6 2090 aa-0.01□□□□□ -2.41
SKP1-203ENST00000517625 MUC17Q685J3 4493 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 SOGA1O94964 1423 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 B2MP61769 119 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 COX6A2Q02221 97 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 CYP2G1PQ6ZSU1 146 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 TANC1Q9C0D5 1861 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 LAMB1P07942 1786 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 KNDC1Q76NI1 1749 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 FMN2Q9NZ56 1722 aa-0.02□□□□□ -2.41
SKP1-203ENST00000517625 SMG6Q86US8 1419 aaKnown RBP-0.03□□□□□ -2.41
SKP1-203ENST00000517625 ARAP2Q8WZ64 1704 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 J3QLW9 94 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 SCGB1A1P11684 91 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 ESPL1Q14674 2120 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 SMIM11BQ8TCY0 68 aa-0.03□□□□□ -2.41
SKP1-203ENST00000517625 SUPT6HQ7KZ85 1726 aaKnown RBP-0.04□□□□□ -2.42
SKP1-203ENST00000517625 NHSQ6T4R5 1651 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 GVQW2A0A096LPI5 108 aaPredicted RBP-0.04□□□□□ -2.42
SKP1-203ENST00000517625 COX4I1P13073 169 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 CCL3L1P16619 93 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 MMGT1Q8N4V1 131 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 IFI27L1Q96BM0 104 aa-0.04□□□□□ -2.42
SKP1-203ENST00000517625 AIF1LQ9BQI0 150 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms