RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PHOX2AO14813 284 aa5.41□□□□□ -1.54
PABPC1-202ENST00000517403 TSHBP01222 138 aa5.41□□□□□ -1.54
PABPC1-202ENST00000517403 SMIM17P0DL12 118 aa5.41□□□□□ -1.54
PABPC1-202ENST00000517403 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
PABPC1-202ENST00000517403 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
PABPC1-202ENST00000517403 PLAC8Q9NZF1 115 aa5.41□□□□□ -1.54
PABPC1-202ENST00000517403 PDE6DO43924 150 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 COX6A2Q02221 97 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 TMEM97Q5BJF2 176 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 KCNIP4Q6PIL6 250 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 LYPD6BQ8NI32 183 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 CHCHD10Q8WYQ3 142 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-202ENST00000517403 FAM104AQ969W3 186 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 TMEM242Q9NWH2 141 aa5.4□□□□□ -1.54
PABPC1-202ENST00000517403 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-202ENST00000517403 C9JQL5 133 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 SMKR1H3BMG3 65 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 NCR2O95944 276 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 TRGC1P0CF51 173 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 FGF6P10767 208 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 ESDP10768 282 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 COTL1Q14019 142 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 TWIST1Q15672 202 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 PAPPA-AS1Q5QFB9 102 aa5.39□□□□□ -1.55
PABPC1-202ENST00000517403 IGHV3-64A0A075B6Q5 118 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 TRAV8-4A0A0B4J246 113 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 A0A1B0GVG6 124 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 SDHAF1A6NFY7 115 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 F2Z2F3 143 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 H7C1H1 209 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 EIF5AP63241 154 aaKnown RBP5.38□□□□□ -1.55
PABPC1-202ENST00000517403 PRR3P79522 188 aaKnown RBP5.38□□□□□ -1.55
PABPC1-202ENST00000517403 RNASE13Q5GAN3 156 aaKnown RBP5.38□□□□□ -1.55
PABPC1-202ENST00000517403 SLC51BQ86UW2 128 aa5.38□□□□□ -1.55
PABPC1-202ENST00000517403 TRBV6-5A0A0K0K1A5 114 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 PKIAP61925 76 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 FAM231DQ6ZW35 169 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 LINC01551Q86U37 167 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
PABPC1-202ENST00000517403 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 CCL25O15444 150 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 XCL1P47992 114 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
PABPC1-202ENST00000517403 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 RNASEKQ6P5S7 137 aaKnown RBP5.36□□□□□ -1.55
PABPC1-202ENST00000517403 NRACQ8N912 160 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 V9GYV3 84 aa5.36□□□□□ -1.55
PABPC1-202ENST00000517403 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
PABPC1-202ENST00000517403 APCSP02743 223 aa5.35□□□□□ -1.55
PABPC1-202ENST00000517403 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
PABPC1-202ENST00000517403 RAB4AP20338 218 aa5.35□□□□□ -1.55
PABPC1-202ENST00000517403 Q6ZRU5 148 aa5.35□□□□□ -1.55
PABPC1-202ENST00000517403 Q6ZUT4 128 aa5.35□□□□□ -1.55
PABPC1-202ENST00000517403 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
PABPC1-202ENST00000517403 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 XKRY2A2RUG3 117 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 HIGD1CA8MV81 97 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 TMEM250H0YL14 139 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 UBE2L6O14933 153 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 CEBPGP53567 150 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 STPG4Q8N801 248 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.55
PABPC1-202ENST00000517403 TRBV27A0A0K0K1C4 114 aa5.33□□□□□ -1.56
PABPC1-202ENST00000517403 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
PABPC1-202ENST00000517403 NDUFS6O75380 124 aaKnown RBP5.33□□□□□ -1.56
PABPC1-202ENST00000517403 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
PABPC1-202ENST00000517403 EIF5AL1Q6IS14 154 aaKnown RBP5.33□□□□□ -1.56
PABPC1-202ENST00000517403 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
PABPC1-202ENST00000517403 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-202ENST00000517403 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-202ENST00000517403 CDC42SE2Q9NRR3 84 aa5.33□□□□□ -1.56
PABPC1-202ENST00000517403 I3L3M4 83 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
PABPC1-202ENST00000517403 AMMECR1LQ6DCA0 310 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 AKAP14Q86UN6 197 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 NUP35Q8NFH5 326 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 TSKUQ8WUA8 353 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 ISOC2Q96AB3 205 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 LINC01600Q96MT4 127 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 FAM210AQ96ND0 272 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 TMEM191AQ9H0A3 160 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
PABPC1-202ENST00000517403 IGLV4-69A0A075B6H9 119 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-202ENST00000517403 A0A0J9YXV3 536 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 A8MWL6 223 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-202ENST00000517403 PMCHP20382 165 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 RPL23P62829 140 aaKnown RBP5.31□□□□□ -1.56
PABPC1-202ENST00000517403 RPL39P62891 51 aaKnown RBP5.31□□□□□ -1.56
PABPC1-202ENST00000517403 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
PABPC1-202ENST00000517403 BIN3Q9NQY0 253 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms