RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SPTY2D1-AS1A0A0U1RR47 76 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 LOC100130705A0A1B0GUX0 176 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 PPP5D1E7EU14 171 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 FAM107AO95990 144 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 FABP2P12104 132 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 RPS12P25398 132 aaKnown RBP-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 SNCAP37840 140 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 SDHAF4Q5VUM1 108 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 CNPY4Q8N129 248 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 LCN9Q8WX39 176 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 BTF3L4Q96K17 158 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 FAM167A-AS1Q96KT0 104 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 LINC01558Q9Y6Z2 57 aa-4.22□□□□□ -3.08
SNORA40.16-201ENST00000517238 C4AP0C0L4 1744 aa-4.22□□□□□ -3.09
SNORA40.16-201ENST00000517238 C4BP0C0L5 1744 aa-4.22□□□□□ -3.09
SNORA40.16-201ENST00000517238 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 NCALDP61601 193 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 CLEC2AQ6UVW9 174 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 BORCS7Q96B45 105 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 SCN11AQ9UI33 1791 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 CD109Q6YHK3 1445 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 ANKRD36A6QL64 1941 aa-4.23□□□□□ -3.09
SNORA40.16-201ENST00000517238 CAMSAP2Q08AD1 1489 aa-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 PXDNQ92626 1479 aa-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 UBE2L5PA0A1B0GUS4 154 aa-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 A6NIN4 97 aa-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 OGNP20774 298 aaKnown RBP-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 TMCO2Q7Z6W1 182 aaPredicted RBP-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 NOP16Q9Y3C1 178 aaKnown RBP-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 PRG4Q92954 1404 aaPredicted RBP-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 TCOF1Q13428 1488 aaKnown RBP-4.24□□□□□ -3.09
SNORA40.16-201ENST00000517238 RGPD2P0DJD1 1756 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 CUX1P39880 1505 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 IGLC7A0M8Q6 106 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 HBDP02042 147 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 RPL19P84098 196 aaKnown RBP-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 C5orf38Q86SI9 138 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 ST13P4Q8IZP2 240 aaPredicted RBP-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 NLRP1Q9C000 1473 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 DNAH14Q0VDD8 3507 aa-4.25□□□□□ -3.09
SNORA40.16-201ENST00000517238 TECPR2O15040 1411 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 TGIF2-C20orf24A0A0A6YYL0 155 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 TRBV27A0A0K0K1C4 114 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 A0A1B0GU69 56 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 PDE6DO43924 150 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 TNNC2P02585 160 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 STAG3L2P0CL84 134 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 PET100P0DJ07 73 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 TMEM78Q5T7P6 136 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 TSGA13Q96PP4 275 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 PARVGQ9HBI0 331 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 LENEPQ9Y5L5 61 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 CEP250Q9BV73 2442 aa-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 XRN1Q8IZH2 1706 aaKnown RBP-4.26□□□□□ -3.09
SNORA40.16-201ENST00000517238 K7EP13 123 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 DEFB136Q30KP8 78 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 SPTSSBQ8NFR3 76 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 PRO1933Q9H354 126 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 MYH13Q9UKX3 1938 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 SZT2Q5T011 3432 aa-4.27□□□□□ -3.09
SNORA40.16-201ENST00000517238 A8MTW9 85 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 H3BQV1 296 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 SFT2D2O95562 160 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 STAG3L3P0CL85 134 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 HSD11B1P28845 292 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 RTL8BQ17RB0 113 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 CCDC124Q96CT7 223 aaKnown RBP-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 RTL8AQ9BWD3 113 aa-4.28□□□□□ -3.09
SNORA40.16-201ENST00000517238 ATP7BP35670 1465 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 C1orf167Q5SNV9 1468 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 F8VZ95 297 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 CHP2O43745 196 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 HIST1H1DP16402 221 aaKnown RBP-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 CRYGSP22914 178 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 CEBPGP53567 150 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 UBE2G1P62253 170 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 TNNC1P63316 161 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 COX6B2Q6YFQ2 88 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 ATP6V0E2Q8NHE4 81 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 OTORQ9NRC9 128 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 PSENENQ9NZ42 101 aa-4.29□□□□□ -3.1
SNORA40.16-201ENST00000517238 ANXA8P13928 327 aa-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 BLVRAP53004 296 aa-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 NKAIN1Q4KMZ8 207 aa-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 ANXA8L1Q5VT79 327 aa-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 CDC26Q8NHZ8 85 aa-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 TIMM8BQ9Y5J9 83 aaPredicted RBP-4.3□□□□□ -3.1
SNORA40.16-201ENST00000517238 PBRM1Q86U86 1689 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 RIMS1Q86UR5 1692 aaKnown RBP-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 BORCS7-ASMTA0A0B4J1R7 106 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 IQCF5A8MTL0 148 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 J3QLW9 94 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 SCGB1A1P11684 91 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 SRP9P49458 86 aaKnown RBP-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 C10orf128Q5T292 105 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 CROCCP2Q86T23 111 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 FAIMQ9NVQ4 179 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 SMPXQ9UHP9 88 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 PLEKHH2Q8IVE3 1493 aa-4.31□□□□□ -3.1
SNORA40.16-201ENST00000517238 KIAA1551Q9HCM1 1747 aa-4.32□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms