RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 CKS2P33552 79 aa12.18□□□□□ -0.46
LPCAT1-206ENST00000514484 HIGD2BQ4VC39 106 aa12.18□□□□□ -0.46
LPCAT1-206ENST00000514484 D6R8Y8 96 aa12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 XCL1P47992 114 aa12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 CNBPP62633 177 aaKnown RBP12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 MRPL52Q86TS9 123 aaKnown RBP12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.17□□□□□ -0.46
LPCAT1-206ENST00000514484 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 F8W036 122 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 PANO1I0J062 215 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 PPP1R2P9O14990 202 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 CCL25O15444 150 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 S100A8P05109 93 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 FOXI1Q12951 378 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 CLLU1Q5K131 121 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
LPCAT1-206ENST00000514484 LINC00862A6NCI5 91 aa12.15□□□□□ -0.46
LPCAT1-206ENST00000514484 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
LPCAT1-206ENST00000514484 NPYP01303 97 aa12.15□□□□□ -0.46
LPCAT1-206ENST00000514484 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 IFITM2Q01629 132 aa12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
LPCAT1-206ENST00000514484 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
LPCAT1-206ENST00000514484 CFAP161Q6P656 301 aa12.13□□□□□ -0.47
LPCAT1-206ENST00000514484 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
LPCAT1-206ENST00000514484 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
LPCAT1-206ENST00000514484 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
LPCAT1-206ENST00000514484 Q6ZUT4 128 aa12.12□□□□□ -0.47
LPCAT1-206ENST00000514484 ATP5L2Q7Z4Y8 100 aa12.12□□□□□ -0.47
LPCAT1-206ENST00000514484 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
LPCAT1-206ENST00000514484 CHTF8P0CG12 524 aa12.11□□□□□ -0.47
LPCAT1-206ENST00000514484 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
LPCAT1-206ENST00000514484 SS18Q15532 418 aa12.11□□□□□ -0.47
LPCAT1-206ENST00000514484 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
LPCAT1-206ENST00000514484 PKHD1L1Q86WI1 4243 aa12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 DMBT1Q9UGM3 2413 aaPredicted RBP12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 TCAPO15273 167 aa12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 LINC00526Q96FQ7 95 aa12.1□□□□□ -0.47
LPCAT1-206ENST00000514484 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
LPCAT1-206ENST00000514484 PPBPP02775 128 aa12.08□□□□□ -0.48
LPCAT1-206ENST00000514484 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
LPCAT1-206ENST00000514484 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
LPCAT1-206ENST00000514484 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
LPCAT1-206ENST00000514484 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 PHOX2AO14813 284 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 TMEM136Q6ZRR5 245 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
LPCAT1-206ENST00000514484 HERC1Q15751 4861 aa12.06□□□□□ -0.48
LPCAT1-206ENST00000514484 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
LPCAT1-206ENST00000514484 COX6A2Q02221 97 aa12.05□□□□□ -0.48
LPCAT1-206ENST00000514484 CIRBPQ14011 172 aaKnown RBP12.05□□□□□ -0.48
LPCAT1-206ENST00000514484 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
LPCAT1-206ENST00000514484 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
LPCAT1-206ENST00000514484 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 C1orf196B1AJZ1 125 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 RPL37AP61513 92 aaKnown RBP12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 PRSS3P2Q8NHM4 247 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 SPACA4Q8TDM5 124 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 FAM104AQ969W3 186 aa12.04□□□□□ -0.48
LPCAT1-206ENST00000514484 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
LPCAT1-206ENST00000514484 TMEM218A2RU14 115 aa12.03□□□□□ -0.48
LPCAT1-206ENST00000514484 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
LPCAT1-206ENST00000514484 A0A087WYN8 130 aa12.02□□□□□ -0.49
LPCAT1-206ENST00000514484 COX7A2LO14548 114 aa12.02□□□□□ -0.49
LPCAT1-206ENST00000514484 MALP21145 153 aa12.02□□□□□ -0.49
LPCAT1-206ENST00000514484 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
LPCAT1-206ENST00000514484 RAB5AP20339 215 aa12.01□□□□□ -0.49
LPCAT1-206ENST00000514484 C5orf38Q86SI9 138 aa12.01□□□□□ -0.49
LPCAT1-206ENST00000514484 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
LPCAT1-206ENST00000514484 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
LPCAT1-206ENST00000514484 MAP1LC3AQ9H492 121 aa12.01□□□□□ -0.49
LPCAT1-206ENST00000514484 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
LPCAT1-206ENST00000514484 A0A096LNI7 61 aa11.99□□□□□ -0.49
LPCAT1-206ENST00000514484 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
LPCAT1-206ENST00000514484 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
LPCAT1-206ENST00000514484 IGLV4-69A0A075B6H9 119 aa11.98□□□□□ -0.49
LPCAT1-206ENST00000514484 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
LPCAT1-206ENST00000514484 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
LPCAT1-206ENST00000514484 MRPS36P82909 103 aaKnown RBP11.98□□□□□ -0.49
LPCAT1-206ENST00000514484 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
LPCAT1-206ENST00000514484 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
LPCAT1-206ENST00000514484 SEC11CQ9BY50 192 aa11.97□□□□□ -0.49
LPCAT1-206ENST00000514484 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
LPCAT1-206ENST00000514484 LRP1Q07954 4544 aaKnown RBP11.97□□□□□ -0.49
LPCAT1-206ENST00000514484 PRSS47A8MTI9 375 aa11.96□□□□□ -0.49
LPCAT1-206ENST00000514484 IFI27P40305 119 aaPredicted RBP11.96□□□□□ -0.49
LPCAT1-206ENST00000514484 Q6ZRU5 148 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms