RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CDC34P49427 236 aaPredicted RBP1.79□□□□□ -2.12
CHD1-211ENST00000514344 UBE2G1P62253 170 aa1.79□□□□□ -2.12
CHD1-211ENST00000514344 COTL1Q14019 142 aa1.79□□□□□ -2.12
CHD1-211ENST00000514344 DAND5Q8N907 189 aa1.79□□□□□ -2.12
CHD1-211ENST00000514344 ALG5Q9Y673 324 aa1.79□□□□□ -2.12
CHD1-211ENST00000514344 KRBOX1C9JBD0 128 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 H0YIZ8 118 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 SCGB1D1O95968 90 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 SAPCD1Q5SSQ6 148 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 Q6ZNX1 250 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 PQLC2Q6ZP29 291 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 LINC00469Q8N7U9 141 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 WFDC1Q9HC57 220 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 NOL3O60936 208 aaKnown RBP1.78□□□□□ -2.12
CHD1-211ENST00000514344 GCHFRP30047 84 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 RPL28P46779 137 aaKnown RBP1.78□□□□□ -2.12
CHD1-211ENST00000514344 SUMO4Q6EEV6 95 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 BTF3L4Q96K17 158 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 V9GYH0 126 aa1.78□□□□□ -2.12
CHD1-211ENST00000514344 RPL37AP8A6NKH3 93 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 CENPXA8MT69 81 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 Q86TA4 180 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 RPL39LQ96EH5 51 aaKnown RBP1.77□□□□□ -2.13
CHD1-211ENST00000514344 KIR2DL4Q99706 377 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 XAGE1AQ9HD64 81 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 PEX7O00628 323 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 BTCP35070 178 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 ATP6V1FQ16864 119 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 C10orf25Q5T742 122 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 PPP1R1CQ8WVI7 109 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 AP1S3Q96PC3 154 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 IMMP2LQ96T52 175 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 KCNIP2Q9NS61 270 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 INMT-MINDY4F8WBC2 141 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 M0QY20 66 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 OR5AL1P0C617 328 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 ESDP10768 282 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 SPAG11BQ08648 103 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 Q6Q795 121 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 CD164L2Q6UWJ8 174 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 PGLYRP4Q96LB8 373 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
CHD1-211ENST00000514344 SERTM2A0A1B0GWG4 89 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 COX7A2LO14548 114 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 NTF3P20783 257 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
CHD1-211ENST00000514344 DNLZQ5SXM8 178 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 C2orf82Q6UX34 121 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 UNQ6190/PRO20217Q6UXQ8 127 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 MARVELD1Q9BSK0 173 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 MRPS26Q9BYN8 205 aaKnown RBP1.76□□□□□ -2.13
CHD1-211ENST00000514344 RNASE7Q9H1E1 156 aaKnown RBP1.76□□□□□ -2.13
CHD1-211ENST00000514344 C11orf1Q9H5F2 150 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 FAM240BA0A1B0GVZ2 78 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 GIPP09681 153 aaPredicted RBP1.76□□□□□ -2.13
CHD1-211ENST00000514344 IL7P13232 177 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 AKR1C3P42330 323 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 KRTAP10-7P60409 375 aaPredicted RBP1.76□□□□□ -2.13
CHD1-211ENST00000514344 RASL11AQ6T310 242 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 LINC00846Q9NV44 126 aa1.76□□□□□ -2.13
CHD1-211ENST00000514344 LYRM1O43325 122 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 APCSP02743 223 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 STAG3L2P0CL84 134 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 STAG3L3P0CL85 134 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 FHITP49789 147 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 C9orf129Q5T035 196 aaKnown RBP1.75□□□□□ -2.13
CHD1-211ENST00000514344 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 ORAOV1Q8WV07 137 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 C2orf48Q96LS8 159 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 TOMM7Q9P0U1 55 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 NUPR1O60356 82 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 BCE1O60756 84 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 ATP6V0CP27449 155 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 H2BFSP57053 126 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 PRLHP81277 87 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 TWIST1Q15672 202 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 SPAG11AQ6PDA7 123 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 BAGE2Q86Y30 109 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 STOML3Q8TAV4 291 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 TMEM101Q96IK0 257 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 NIT2Q9NQR4 276 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 NDUFA12Q9UI09 145 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
CHD1-211ENST00000514344 IGKV2-28A0A075B6P5 120 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 SDHAF1A6NFY7 115 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 C9orf92A6NGG3 77 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 PLA2G10O15496 165 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 SSNA1O43805 119 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 PAGE4O60829 102 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 TNFRSF6BO95407 300 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 IGKV2D-28P01615 120 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 PMCHP20382 165 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 UBE2AP49459 152 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
CHD1-211ENST00000514344 TMEM242Q9NWH2 141 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms