RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CXCL1P09341 107 aa6.43□□□□□ -1.38
SFXN1-210ENST00000513725 NTF3P20783 257 aa6.43□□□□□ -1.38
SFXN1-210ENST00000513725 C1orf196B1AJZ1 125 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 CTRLP40313 264 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 RAB32Q13637 225 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 Q6ZNX1 250 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 OR10D4PQ8NGN7 298 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
SFXN1-210ENST00000513725 GCHFRP30047 84 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
SFXN1-210ENST00000513725 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 SCGB1C1Q8TD33 95 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 ALG5Q9Y673 324 aa6.41□□□□□ -1.38
SFXN1-210ENST00000513725 PEX7O00628 323 aa6.4□□□□□ -1.38
SFXN1-210ENST00000513725 UBE2AP49459 152 aa6.4□□□□□ -1.38
SFXN1-210ENST00000513725 FAM19A2Q8N3H0 131 aa6.4□□□□□ -1.38
SFXN1-210ENST00000513725 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.38
SFXN1-210ENST00000513725 TMEM167BQ9NRX6 74 aa6.4□□□□□ -1.38
SFXN1-210ENST00000513725 STAG3L2P0CL84 134 aa6.39□□□□□ -1.39
SFXN1-210ENST00000513725 STAG3L3P0CL85 134 aa6.39□□□□□ -1.39
SFXN1-210ENST00000513725 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
SFXN1-210ENST00000513725 A0A087WXM4 84 aa6.38□□□□□ -1.39
SFXN1-210ENST00000513725 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-210ENST00000513725 CDC34P49427 236 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-210ENST00000513725 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
SFXN1-210ENST00000513725 PYDC2Q56P42 97 aa6.38□□□□□ -1.39
SFXN1-210ENST00000513725 MZT2BQ6NZ67 158 aa6.38□□□□□ -1.39
SFXN1-210ENST00000513725 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
SFXN1-210ENST00000513725 A0A1W2PRE2 83 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 SPINK1P00995 79 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 UBE2G1P62253 170 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 HIST1H2BAQ96A08 127 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 FMC1Q96HJ9 113 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
SFXN1-210ENST00000513725 CYTL1Q9NRR1 136 aa6.37□□□□□ -1.39
SFXN1-210ENST00000513725 IL15RAQ13261 267 aa6.36□□□□□ -1.39
SFXN1-210ENST00000513725 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
SFXN1-210ENST00000513725 S100A5P33763 92 aa6.35□□□□□ -1.39
SFXN1-210ENST00000513725 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
SFXN1-210ENST00000513725 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
SFXN1-210ENST00000513725 CXorf1O96002 111 aa6.34□□□□□ -1.39
SFXN1-210ENST00000513725 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
SFXN1-210ENST00000513725 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
SFXN1-210ENST00000513725 NAP1L6A6NFF2 107 aa6.33□□□□□ -1.4
SFXN1-210ENST00000513725 LTAP01374 205 aa6.33□□□□□ -1.4
SFXN1-210ENST00000513725 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
SFXN1-210ENST00000513725 Q8NBF4 154 aa6.33□□□□□ -1.4
SFXN1-210ENST00000513725 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
SFXN1-210ENST00000513725 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
SFXN1-210ENST00000513725 TRAV13-1A0A0B4J241 112 aa6.32□□□□□ -1.4
SFXN1-210ENST00000513725 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
SFXN1-210ENST00000513725 TRGC1P0CF51 173 aa6.32□□□□□ -1.4
SFXN1-210ENST00000513725 MARVELD1Q9BSK0 173 aa6.32□□□□□ -1.4
SFXN1-210ENST00000513725 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
SFXN1-210ENST00000513725 S100A6P06703 90 aa6.31□□□□□ -1.4
SFXN1-210ENST00000513725 UBE2G2P60604 165 aa6.31□□□□□ -1.4
SFXN1-210ENST00000513725 NKX6-2Q9C056 277 aaPredicted RBP6.31□□□□□ -1.4
SFXN1-210ENST00000513725 SLC25A20O43772 301 aa6.3□□□□□ -1.4
SFXN1-210ENST00000513725 PMCHP20382 165 aa6.3□□□□□ -1.4
SFXN1-210ENST00000513725 Q8N377 158 aa6.3□□□□□ -1.4
SFXN1-210ENST00000513725 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 I3L3M4 83 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 CNPY1Q3B7I2 92 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 GATD1Q8NB37 220 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
SFXN1-210ENST00000513725 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
SFXN1-210ENST00000513725 Q6Q795 121 aa6.28□□□□□ -1.4
SFXN1-210ENST00000513725 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
SFXN1-210ENST00000513725 ZNF727A8MUV8 499 aa6.27□□□□□ -1.41
SFXN1-210ENST00000513725 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
SFXN1-210ENST00000513725 RNASE13Q5GAN3 156 aaKnown RBP6.27□□□□□ -1.41
SFXN1-210ENST00000513725 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.41
SFXN1-210ENST00000513725 PLEKHB2Q96CS7 222 aa6.27□□□□□ -1.41
SFXN1-210ENST00000513725 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
SFXN1-210ENST00000513725 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
SFXN1-210ENST00000513725 HSPB11Q9Y547 144 aa6.27□□□□□ -1.41
SFXN1-210ENST00000513725 UPK1BO75841 260 aa6.26□□□□□ -1.41
SFXN1-210ENST00000513725 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
SFXN1-210ENST00000513725 FAM74A7A6NL05 159 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 CENPXA8MT69 81 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 MT2AP02795 61 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 AKR1C3P42330 323 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 FOXA3P55318 350 aaPredicted RBP6.25□□□□□ -1.41
SFXN1-210ENST00000513725 PRLHP81277 87 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 SEC22CQ9BRL7 303 aa6.25□□□□□ -1.41
SFXN1-210ENST00000513725 ACTR3CQ9C0K3 210 aaPredicted RBP6.25□□□□□ -1.41
SFXN1-210ENST00000513725 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
SFXN1-210ENST00000513725 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 C7orf77A4D0Y5 90 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 GAGE10A6NGK3 116 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 H0YIZ8 118 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 MBP02144 154 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
SFXN1-210ENST00000513725 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms