RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 ISOC2Q96AB3 205 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 PHOX2AO14813 284 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 ZNF25P17030 456 aaPredicted RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 TMEM241Q24JQ0 296 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 RNASEKQ6P5S7 137 aaKnown RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 AMN1Q8IY45 258 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
VEGFA-216ENST00000512683 ST20Q9HBF5 79 aa7.91□□□□□ -1.14
VEGFA-216ENST00000512683 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 MAJINQ3KP22 176 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 FAM74A3Q4VXF1 159 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 TMEM242Q9NWH2 141 aa7.9□□□□□ -1.14
VEGFA-216ENST00000512683 CLLU1Q5K131 121 aa7.89□□□□□ -1.15
VEGFA-216ENST00000512683 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
VEGFA-216ENST00000512683 STPG4Q8N801 248 aa7.89□□□□□ -1.15
VEGFA-216ENST00000512683 OR5A1Q8NGJ0 315 aa7.89□□□□□ -1.15
VEGFA-216ENST00000512683 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
VEGFA-216ENST00000512683 IGHV1-58A0A0C4DH39 117 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
VEGFA-216ENST00000512683 FOXI1Q12951 378 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 RIGQ13278 110 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
VEGFA-216ENST00000512683 NRACQ8N912 160 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 BTF3L4Q96K17 158 aa7.88□□□□□ -1.15
VEGFA-216ENST00000512683 A0A0J9YXV3 536 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 SMIM27A0A1W2PRY6 76 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 ADIRFQ15847 76 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 NAT8Q9UHE5 227 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
VEGFA-216ENST00000512683 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
VEGFA-216ENST00000512683 CCL25O15444 150 aa7.86□□□□□ -1.15
VEGFA-216ENST00000512683 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
VEGFA-216ENST00000512683 VCYO14598 125 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 XCL1P47992 114 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
VEGFA-216ENST00000512683 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
VEGFA-216ENST00000512683 PEA15Q15121 130 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 SS18Q15532 418 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
VEGFA-216ENST00000512683 FAM104BQ5XKR9 115 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 Q6ZRP5 223 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 TNXBP22105 4242 aa7.85□□□□□ -1.15
VEGFA-216ENST00000512683 LRP2P98164 4655 aa7.84□□□□□ -1.15
VEGFA-216ENST00000512683 C7orf77A4D0Y5 90 aa7.84□□□□□ -1.15
VEGFA-216ENST00000512683 SMAGPQ0VAQ4 97 aa7.84□□□□□ -1.15
VEGFA-216ENST00000512683 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
VEGFA-216ENST00000512683 ZNF664Q8N3J9 261 aa7.84□□□□□ -1.15
VEGFA-216ENST00000512683 A0A096LNI7 61 aa7.83□□□□□ -1.16
VEGFA-216ENST00000512683 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
VEGFA-216ENST00000512683 PPP1R17O96001 155 aa7.83□□□□□ -1.16
VEGFA-216ENST00000512683 CAMPP49913 170 aa7.83□□□□□ -1.16
VEGFA-216ENST00000512683 CARD19Q96LW7 228 aa7.83□□□□□ -1.16
VEGFA-216ENST00000512683 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
VEGFA-216ENST00000512683 TRBV24-1A0A075B6N3 115 aa7.82□□□□□ -1.16
VEGFA-216ENST00000512683 FCER1GP30273 86 aa7.82□□□□□ -1.16
VEGFA-216ENST00000512683 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
VEGFA-216ENST00000512683 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
VEGFA-216ENST00000512683 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
VEGFA-216ENST00000512683 A0A1B0GW15 77 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 PPP1R2P9O14990 202 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 KIR2DL4Q99706 377 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
VEGFA-216ENST00000512683 LOC107984640A0A0U1RRK4 108 aa7.8□□□□□ -1.16
VEGFA-216ENST00000512683 CKS2P33552 79 aa7.8□□□□□ -1.16
VEGFA-216ENST00000512683 RPL32P62910 135 aaKnown RBP7.8□□□□□ -1.16
VEGFA-216ENST00000512683 RNASE13Q5GAN3 156 aaKnown RBP7.8□□□□□ -1.16
VEGFA-216ENST00000512683 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
VEGFA-216ENST00000512683 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
VEGFA-216ENST00000512683 FAM104AQ969W3 186 aa7.8□□□□□ -1.16
VEGFA-216ENST00000512683 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
VEGFA-216ENST00000512683 TNFRSF6BO95407 300 aa7.79□□□□□ -1.16
VEGFA-216ENST00000512683 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
VEGFA-216ENST00000512683 HBBP68871 147 aa7.79□□□□□ -1.16
VEGFA-216ENST00000512683 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
VEGFA-216ENST00000512683 D6R8Y8 96 aa7.78□□□□□ -1.16
VEGFA-216ENST00000512683 NPYP01303 97 aa7.78□□□□□ -1.16
VEGFA-216ENST00000512683 RPL39P62891 51 aaKnown RBP7.78□□□□□ -1.16
VEGFA-216ENST00000512683 Q6ZUT4 128 aa7.78□□□□□ -1.16
VEGFA-216ENST00000512683 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
VEGFA-216ENST00000512683 F8W036 122 aa7.77□□□□□ -1.17
VEGFA-216ENST00000512683 F8WDY8 70 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms