RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TRBV6-4A0A1B0GX49 114 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 CCL3L1P16619 93 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 PDE6GP18545 87 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 SPAG11BQ08648 103 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 SPAG11AQ6PDA7 123 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 SEC16AO15027 2179 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 ARMS2P0C7Q2 107 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 SAA2P0DJI9 122 aaPredicted RBP3.45□□□□□ -1.86
CHD1-208ENST00000512392 PPP1R1CQ8WVI7 109 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 V9GYH0 126 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 NRXN2Q9P2S2 1712 aa3.45□□□□□ -1.86
CHD1-208ENST00000512392 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
CHD1-208ENST00000512392 M0R3E3 92 aa3.44□□□□□ -1.86
CHD1-208ENST00000512392 Q8N9L7 120 aa3.44□□□□□ -1.86
CHD1-208ENST00000512392 DOCK11Q5JSL3 2073 aa3.44□□□□□ -1.86
CHD1-208ENST00000512392 LOC285095A0A1B0GVY8 99 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 LEPROTL1O95214 131 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 Q6JHZ5 121 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 COX7B2Q8TF08 81 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 TTTY12Q9BZ98 90 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 UBE2D4Q9Y2X8 147 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 CDC42BPGQ6DT37 1551 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 LAMA4Q16363 1823 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 SIPA1L3O60292 1781 aaPredicted RBP3.43□□□□□ -1.86
CHD1-208ENST00000512392 CFAP43Q8NDM7 1665 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 CEP170BQ9Y4F5 1589 aaPredicted RBP3.43□□□□□ -1.86
CHD1-208ENST00000512392 JMJD7-PLA2G4BH0Y9G9 81 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 WFDC10AQ9H1F0 79 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 TP53TG3Q9ULZ0 132 aa3.43□□□□□ -1.86
CHD1-208ENST00000512392 LAMC1P11047 1609 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 PDCD11Q14690 1871 aaKnown RBP3.42□□□□□ -1.86
CHD1-208ENST00000512392 SIP14410 1827 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 ABCA4P78363 2273 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 H3BVH4 76 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 S100A3P33764 101 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 SMIM5Q71RC9 77 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 RALGAPBQ86X10 1494 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 NESP48681 1621 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 FXYD6-FXYD2A0A087WZ82 144 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 RNASE3P12724 160 aaKnown RBP3.42□□□□□ -1.86
CHD1-208ENST00000512392 IL9P15248 144 aa3.42□□□□□ -1.86
CHD1-208ENST00000512392 BAZ2BQ9UIF8 2168 aaKnown RBP3.41□□□□□ -1.86
CHD1-208ENST00000512392 PIK3C2BO00750 1634 aa3.41□□□□□ -1.86
CHD1-208ENST00000512392 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
CHD1-208ENST00000512392 ARFGEF3Q5TH69 2177 aa3.41□□□□□ -1.86
CHD1-208ENST00000512392 A0A087WVE0 104 aa3.4□□□□□ -1.86
CHD1-208ENST00000512392 NBDYA0A0U1RRE5 68 aa3.4□□□□□ -1.86
CHD1-208ENST00000512392 IGLV3-19P01714 112 aa3.4□□□□□ -1.86
CHD1-208ENST00000512392 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
CHD1-208ENST00000512392 C4orf3Q8WVX3 66 aa3.4□□□□□ -1.86
CHD1-208ENST00000512392 A0A1B0GUL6 1792 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 CD163L1Q9NR16 1453 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 GBF1Q92538 1859 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 D6R8Y8 96 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 DNAL4O96015 105 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 CCL18P55774 89 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 ZNF563Q8TA94 476 aa3.4□□□□□ -1.87
CHD1-208ENST00000512392 PRRC2BQ5JSZ5 2229 aaKnown RBP3.39□□□□□ -1.87
CHD1-208ENST00000512392 CEP192Q8TEP8 1941 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 PREX1Q8TCU6 1659 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 IGKV2D-24A0A075B6R9 120 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 A0A087WTM6 91 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 A0A1W2PNN7 141 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 MROH2AA6NES4 1674 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 SPTBP11277 2137 aa3.39□□□□□ -1.87
CHD1-208ENST00000512392 CRYBG1Q9Y4K1 1723 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 FAM103A1Q9BTL3 118 aaKnown RBP3.38□□□□□ -1.87
CHD1-208ENST00000512392 LRRC37A3O60309 1634 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 ARFGEF1Q9Y6D6 1849 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 F8VRH5 84 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
CHD1-208ENST00000512392 GNG13Q9P2W3 67 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 KLK9Q9UKQ9 250 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 MED12Q93074 2177 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 SHANK1Q9Y566 2161 aa3.38□□□□□ -1.87
CHD1-208ENST00000512392 BRWD1Q9NSI6 2320 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 PI4KAP42356 2102 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 LRRC7Q96NW7 1537 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
CHD1-208ENST00000512392 BAGE3Q86Y29 109 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 BAGE2Q86Y30 109 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 ATRXP46100 2492 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 DLEC1Q9Y238 1755 aa3.37□□□□□ -1.87
CHD1-208ENST00000512392 FAM74A4Q5TZK3 123 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 FXYD6Q9H0Q3 95 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 PAPPAQ13219 1627 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 ALKQ9UM73 1620 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 RREB1Q92766 1687 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 IGKV2-29A2NJV5 120 aaPredicted RBP3.36□□□□□ -1.87
CHD1-208ENST00000512392 M0R135 149 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 C10orf55Q5SWW7 151 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 LINC01558Q9Y6Z2 57 aa3.36□□□□□ -1.87
CHD1-208ENST00000512392 ABCA5Q8WWZ7 1642 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 TRBV7-4A0A0J9YYF1 115 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 LINC00315P59091 139 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 FXYD3Q14802 87 aa3.35□□□□□ -1.87
CHD1-208ENST00000512392 Q86TA4 180 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms