RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 PEA15Q15121 130 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 FAM162BQ5T6X4 162 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 SDIM1Q6ZPB5 146 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 NTM-AS1Q6ZSK4 140 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 COX8CQ7Z4L0 72 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 ZFP82Q8N141 532 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 YPEL4Q96NS1 127 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 AQP10Q96PS8 301 aa4.21□□□□□ -1.74
COPS4-209ENST00000511653 ACTR3CQ9C0K3 210 aaPredicted RBP4.21□□□□□ -1.74
COPS4-209ENST00000511653 MBP02144 154 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 RPL19P84098 196 aaKnown RBP4.2□□□□□ -1.74
COPS4-209ENST00000511653 SERF2P84101 59 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 CIRBPQ14011 172 aaKnown RBP4.2□□□□□ -1.74
COPS4-209ENST00000511653 ZNF56Q15929 161 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 MIAQ16674 131 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 Q6ZRP5 223 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 LITAFQ99732 161 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 CHCHD5Q9BSY4 110 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 SMCO4Q9NRQ5 59 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
COPS4-209ENST00000511653 IGLV10-54A0A075B6I4 117 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 MUC21A0A0G2JKD1 596 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 MUC21A0A140T8X8 626 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 CTXND1A0A1B0GTU2 59 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 C9JQL5 133 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 H0Y8G0 127 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 MT-ND4LP03901 98 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 SULT1A2P50226 295 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 RBX1P62877 108 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 RPL7L1Q6DKI1 246 aaKnown RBP4.19□□□□□ -1.74
COPS4-209ENST00000511653 Q6ZRU5 148 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 INO80EQ8NBZ0 244 aaPredicted RBP4.19□□□□□ -1.74
COPS4-209ENST00000511653 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 LTAP01374 205 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 RAB4BP61018 213 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
COPS4-209ENST00000511653 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 FMC1Q96HJ9 113 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 VAX2Q9UIW0 290 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 ZFP30Q9Y2G7 519 aa4.19□□□□□ -1.74
COPS4-209ENST00000511653 UBE2G1P62253 170 aa4.18□□□□□ -1.74
COPS4-209ENST00000511653 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
COPS4-209ENST00000511653 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
COPS4-209ENST00000511653 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
COPS4-209ENST00000511653 GFRA4Q9GZZ7 299 aa4.18□□□□□ -1.74
COPS4-209ENST00000511653 NIT2Q9NQR4 276 aa4.18□□□□□ -1.74
COPS4-209ENST00000511653 A0A087WZ39 114 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 TRBV6-1A0A0K0K1D8 114 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 MAP1LC3B2A6NCE7 125 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 PHOX2AO14813 284 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 NDUFS6O75380 124 aaKnown RBP4.17□□□□□ -1.74
COPS4-209ENST00000511653 RAB5AP20339 215 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 FABP9Q0Z7S8 132 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 C20orf203Q8NBC4 194 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 DERL1Q9BUN8 251 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 MAP1LC3BQ9GZQ8 125 aa4.17□□□□□ -1.74
COPS4-209ENST00000511653 C7orf77A4D0Y5 90 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 SNAI2O43623 268 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 AKR1C3P42330 323 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 EIF5AP63241 154 aaKnown RBP4.16□□□□□ -1.74
COPS4-209ENST00000511653 REG3AQ06141 175 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 RHEBQ15382 184 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 KIF25-AS1Q9Y6Z4 181 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 TRBV25-1A0A075B6N4 114 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 FHITP49789 147 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 RAB5CP51148 216 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 PKIAP61925 76 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 IQCJQ1A5X6 159 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 PYY3Q5JQD4 70 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 SPANXN1Q5VSR9 72 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 EIF5AL1Q6IS14 154 aaKnown RBP4.16□□□□□ -1.74
COPS4-209ENST00000511653 C15orf56Q8N910 161 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 TPPP3Q9BW30 176 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
COPS4-209ENST00000511653 IGHV1-24A0A0C4DH33 117 aa4.15□□□□□ -1.75
COPS4-209ENST00000511653 CXCL1P09341 107 aa4.15□□□□□ -1.75
COPS4-209ENST00000511653 OR5AL1P0C617 328 aa4.15□□□□□ -1.75
COPS4-209ENST00000511653 AKR1C8PQ5T2L2 129 aa4.15□□□□□ -1.75
COPS4-209ENST00000511653 RNF185Q96GF1 192 aa4.15□□□□□ -1.75
COPS4-209ENST00000511653 MUC2Q02817 5179 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 BORCS7-ASMTA0A0B4J1R7 106 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 A0A1B0GV50 99 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 M0QY20 66 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 MGPP08493 103 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 GZMBP10144 247 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 PRR3P79522 188 aaKnown RBP4.14□□□□□ -1.75
COPS4-209ENST00000511653 COX6A2Q02221 97 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 DPH3Q96FX2 82 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 LINC01600Q96MT4 127 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
COPS4-209ENST00000511653 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
COPS4-209ENST00000511653 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
COPS4-209ENST00000511653 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms