RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 CEP295Q9C0D2 2601 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 SPAG11BQ08648 103 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
HTT-208ENST00000510626 Q8N9W7 124 aa6.34□□□□□ -1.39
HTT-208ENST00000510626 MIFP14174 115 aa6.34□□□□□ -1.39
HTT-208ENST00000510626 CLPSL1A2RUU4 121 aa6.34□□□□□ -1.39
HTT-208ENST00000510626 PRO0255Q9UI72 69 aa6.34□□□□□ -1.39
HTT-208ENST00000510626 CHD8Q9HCK8 2581 aa6.34□□□□□ -1.4
HTT-208ENST00000510626 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.4
HTT-208ENST00000510626 ZNF80P51504 273 aaPredicted RBP6.33□□□□□ -1.4
HTT-208ENST00000510626 UBE2D1P51668 147 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 CCKP06307 115 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
HTT-208ENST00000510626 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 ODF3L1Q8IXM7 274 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 CGB3P0DN86 165 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 CGB7P0DN87 165 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 IGKV2D-26A0A0A0MRZ7 120 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
HTT-208ENST00000510626 WISP1O95388 367 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
HTT-208ENST00000510626 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
HTT-208ENST00000510626 Q9HAA7 133 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 SEM1Q6ZVN7 128 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 CTSZQ9UBR2 303 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 DAZAP2Q15038 168 aaPredicted RBP6.32□□□□□ -1.4
HTT-208ENST00000510626 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 DIAPH2-AS1Q14236 149 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 A0A087WZ39 114 aa6.32□□□□□ -1.4
HTT-208ENST00000510626 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
HTT-208ENST00000510626 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 TTTY13Q9BZ97 58 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 ODF3BA8MYP8 253 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 H3BPC8 53 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 XGP55808 180 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 Q6ZQT7 251 aa6.31□□□□□ -1.4
HTT-208ENST00000510626 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 LINC00322Q6ZN03 302 aaPredicted RBP6.3□□□□□ -1.4
HTT-208ENST00000510626 NCR3O14931 201 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 IGF1P05019 195 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 FBXL19-AS1Q494R0 122 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 H0Y9J4 135 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 A6NED7 52 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 CD164L2Q6UWJ8 174 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 CLPSL2Q6UWE3 100 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 IGHV4-28A0A0C4DH34 117 aa6.3□□□□□ -1.4
HTT-208ENST00000510626 EBI3Q14213 229 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 PLA2G2CQ5R387 149 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 IL17DQ8TAD2 202 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 FASNP49327 2511 aaKnown RBP6.29□□□□□ -1.4
HTT-208ENST00000510626 FRMD6-AS1P0C7T7 363 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 RITA1Q96K30 269 aa6.29□□□□□ -1.4
HTT-208ENST00000510626 NHLRC4P0CG21 123 aaPredicted RBP6.29□□□□□ -1.4
HTT-208ENST00000510626 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
HTT-208ENST00000510626 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
HTT-208ENST00000510626 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
HTT-208ENST00000510626 TRBV6-4A0A1B0GX49 114 aa6.28□□□□□ -1.4
HTT-208ENST00000510626 LINC00694P0DN24 101 aa6.28□□□□□ -1.4
HTT-208ENST00000510626 CDKN2A-AS1Q9UH64 79 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 BRI3O95415 125 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 M0R378 163 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 LY6HO94772 140 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 KLLNB2CW77 178 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 Q8N9L7 120 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 ZNF580Q9UK33 172 aa6.27□□□□□ -1.41
HTT-208ENST00000510626 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 SLURP1P55000 103 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 SIRPDQ9H106 197 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 Q96MF0 132 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 CRIP1P50238 77 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 PRYO14603 147 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 Q8IZM0 81 aa6.26□□□□□ -1.41
HTT-208ENST00000510626 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
HTT-208ENST00000510626 ESRGQ1W209 222 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 DEFB121Q5J5C9 76 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
HTT-208ENST00000510626 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 IGHV4-59P01825 116 aa6.25□□□□□ -1.41
HTT-208ENST00000510626 REG3AQ06141 175 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 TRBV6-8A0A0A6YYG3 113 aa6.24□□□□□ -1.41
HTT-208ENST00000510626 BRWD1-AS2P59051 145 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms