RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
USP38-202ENST00000510377 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
USP38-202ENST00000510377 C6orf226Q5I0X4 101 aa10.99□□□□□ -0.65
USP38-202ENST00000510377 NOP10Q9NPE3 64 aaKnown RBP10.99□□□□□ -0.65
USP38-202ENST00000510377 FAM236AA0A1B0GUQ0 79 aa10.99□□□□□ -0.65
USP38-202ENST00000510377 FAM236BA0A1B0GV22 79 aa10.99□□□□□ -0.65
USP38-202ENST00000510377 HIST1H4AP62805 103 aaKnown RBP10.99□□□□□ -0.65
USP38-202ENST00000510377 AVPP01185 164 aa10.98□□□□□ -0.65
USP38-202ENST00000510377 VPREB3Q9UKI3 123 aa10.98□□□□□ -0.65
USP38-202ENST00000510377 NXPH4O95158 308 aa10.98□□□□□ -0.65
USP38-202ENST00000510377 GATA3P23771 443 aa10.98□□□□□ -0.65
USP38-202ENST00000510377 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
USP38-202ENST00000510377 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
USP38-202ENST00000510377 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
USP38-202ENST00000510377 RBMY1A1P0DJD3 496 aaKnown RBP10.97□□□□□ -0.65
USP38-202ENST00000510377 RBMY1CP0DJD4 496 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 Q9HAA7 133 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 C5orf38Q86SI9 138 aa10.97□□□□□ -0.65
USP38-202ENST00000510377 ZNF575Q86XF7 245 aa10.96□□□□□ -0.65
USP38-202ENST00000510377 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.65
USP38-202ENST00000510377 ZFHX4Q86UP3 3567 aa10.96□□□□□ -0.66
USP38-202ENST00000510377 H3BT86 120 aa10.96□□□□□ -0.66
USP38-202ENST00000510377 HTN3P15516 51 aa10.96□□□□□ -0.66
USP38-202ENST00000510377 LINC00315P59091 139 aa10.96□□□□□ -0.66
USP38-202ENST00000510377 RPL32P62910 135 aaKnown RBP10.96□□□□□ -0.66
USP38-202ENST00000510377 WFDC11Q8NEX6 87 aa10.96□□□□□ -0.66
USP38-202ENST00000510377 A0A096LPF7 62 aa10.95□□□□□ -0.66
USP38-202ENST00000510377 ADAMTSL4-AS1Q5T5F5 129 aa10.95□□□□□ -0.66
USP38-202ENST00000510377 CCDC179H3BU77 68 aa10.95□□□□□ -0.66
USP38-202ENST00000510377 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
USP38-202ENST00000510377 MUC4Q99102 2169 aa10.95□□□□□ -0.66
USP38-202ENST00000510377 PLA2G2AP14555 144 aa10.94□□□□□ -0.66
USP38-202ENST00000510377 POM121L12Q8N7R1 296 aa10.94□□□□□ -0.66
USP38-202ENST00000510377 CRLF1O75462 422 aa10.94□□□□□ -0.66
USP38-202ENST00000510377 TRBV30A0A0K0K1B3 111 aa10.94□□□□□ -0.66
USP38-202ENST00000510377 NDUFA7O95182 113 aa10.93□□□□□ -0.66
USP38-202ENST00000510377 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
USP38-202ENST00000510377 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
USP38-202ENST00000510377 PSMB8P28062 276 aa10.93□□□□□ -0.66
USP38-202ENST00000510377 H7C423 109 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 TMEM86BQ8N661 226 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 USP24Q9UPU5 2620 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 DMXL1Q9Y485 3027 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 INAFM2P0DMQ5 153 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
USP38-202ENST00000510377 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
USP38-202ENST00000510377 Q9UF83 564 aa10.91□□□□□ -0.66
USP38-202ENST00000510377 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
USP38-202ENST00000510377 Q6ZTI0 123 aa10.91□□□□□ -0.66
USP38-202ENST00000510377 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 MALP21145 153 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 KRTAP10-9P60411 292 aa10.9□□□□□ -0.66
USP38-202ENST00000510377 XCL1P47992 114 aa10.9□□□□□ -0.67
USP38-202ENST00000510377 FHL3Q13643 280 aa10.89□□□□□ -0.67
USP38-202ENST00000510377 ATP5G1P05496 136 aa10.89□□□□□ -0.67
USP38-202ENST00000510377 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
USP38-202ENST00000510377 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
USP38-202ENST00000510377 DNAJC30Q96LL9 226 aa10.89□□□□□ -0.67
USP38-202ENST00000510377 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
USP38-202ENST00000510377 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 Q6ZSN1 163 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 ZZEF1O43149 2961 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 K7EQD1 137 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
USP38-202ENST00000510377 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
USP38-202ENST00000510377 J3QLI3 93 aa10.87□□□□□ -0.67
USP38-202ENST00000510377 PYGO1Q9Y3Y4 419 aa10.87□□□□□ -0.67
USP38-202ENST00000510377 LST1O00453 97 aa10.86□□□□□ -0.67
USP38-202ENST00000510377 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
USP38-202ENST00000510377 COX7A2LO14548 114 aa10.86□□□□□ -0.67
USP38-202ENST00000510377 LECT2O14960 151 aa10.85□□□□□ -0.67
USP38-202ENST00000510377 HERV-K104P63124 156 aa10.85□□□□□ -0.67
USP38-202ENST00000510377 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 TEP1Q99973 2627 aaKnown RBP10.84□□□□□ -0.67
USP38-202ENST00000510377 NDUFA1O15239 70 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 COX6A2Q02221 97 aa10.84□□□□□ -0.67
USP38-202ENST00000510377 CCL24O00175 119 aa10.83□□□□□ -0.68
USP38-202ENST00000510377 LAMTOR3Q9UHA4 124 aa10.83□□□□□ -0.68
USP38-202ENST00000510377 ESM1Q9NQ30 184 aa10.83□□□□□ -0.68
USP38-202ENST00000510377 ACYP1P07311 99 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
USP38-202ENST00000510377 IGLV10-54A0A075B6I4 117 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 SS18Q15532 418 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 SLPIP03973 132 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
USP38-202ENST00000510377 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
USP38-202ENST00000510377 AMELXQ99217 191 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms