RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 NDUFS6O75380 124 aaKnown RBP6.9□□□□□ -1.3
RNF4-212ENST00000509258 NRACQ8N912 160 aa6.9□□□□□ -1.3
RNF4-212ENST00000509258 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
RNF4-212ENST00000509258 LINC00526Q96FQ7 95 aa6.9□□□□□ -1.3
RNF4-212ENST00000509258 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
RNF4-212ENST00000509258 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
RNF4-212ENST00000509258 PMCHP20382 165 aa6.89□□□□□ -1.31
RNF4-212ENST00000509258 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
RNF4-212ENST00000509258 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
RNF4-212ENST00000509258 LINC00959A0A1B0GUT2 108 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
RNF4-212ENST00000509258 COX6A2Q02221 97 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 TMEM101Q96IK0 257 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 PLAC8Q9NZF1 115 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
RNF4-212ENST00000509258 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
RNF4-212ENST00000509258 TRBV27A0A0K0K1C4 114 aa6.87□□□□□ -1.31
RNF4-212ENST00000509258 CCL25O15444 150 aa6.87□□□□□ -1.31
RNF4-212ENST00000509258 XCL1P47992 114 aa6.87□□□□□ -1.31
RNF4-212ENST00000509258 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
RNF4-212ENST00000509258 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
RNF4-212ENST00000509258 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
RNF4-212ENST00000509258 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
RNF4-212ENST00000509258 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
RNF4-212ENST00000509258 PHOX2AO14813 284 aa6.86□□□□□ -1.31
RNF4-212ENST00000509258 ADIRFQ15847 76 aa6.86□□□□□ -1.31
RNF4-212ENST00000509258 TMEM241Q24JQ0 296 aa6.86□□□□□ -1.31
RNF4-212ENST00000509258 FAM104AQ969W3 186 aa6.86□□□□□ -1.31
RNF4-212ENST00000509258 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
RNF4-212ENST00000509258 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
RNF4-212ENST00000509258 A0A096LNI7 61 aa6.85□□□□□ -1.31
RNF4-212ENST00000509258 IGKV2-24A0A0C4DH68 120 aa6.85□□□□□ -1.31
RNF4-212ENST00000509258 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
RNF4-212ENST00000509258 FAM74A3Q4VXF1 159 aa6.85□□□□□ -1.31
RNF4-212ENST00000509258 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
RNF4-212ENST00000509258 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 RIGQ13278 110 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 SS18Q15532 418 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 Q6ZUT4 128 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 STPG4Q8N801 248 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 NAT8Q9UHE5 227 aa6.84□□□□□ -1.31
RNF4-212ENST00000509258 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
RNF4-212ENST00000509258 CAMPP49913 170 aa6.83□□□□□ -1.32
RNF4-212ENST00000509258 SUMO2P61956 95 aaKnown RBP6.83□□□□□ -1.32
RNF4-212ENST00000509258 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
RNF4-212ENST00000509258 NAT8BQ9UHF3 227 aa6.83□□□□□ -1.32
RNF4-212ENST00000509258 UBE2D4Q9Y2X8 147 aa6.83□□□□□ -1.32
RNF4-212ENST00000509258 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
RNF4-212ENST00000509258 RPL39P62891 51 aaKnown RBP6.82□□□□□ -1.32
RNF4-212ENST00000509258 ODF1Q14990 250 aa6.82□□□□□ -1.32
RNF4-212ENST00000509258 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
RNF4-212ENST00000509258 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
RNF4-212ENST00000509258 OPRPNQ99935 248 aaPredicted RBP6.82□□□□□ -1.32
RNF4-212ENST00000509258 LRP2P98164 4655 aa6.82□□□□□ -1.32
RNF4-212ENST00000509258 VCYO14598 125 aa6.81□□□□□ -1.32
RNF4-212ENST00000509258 PPP1R17O96001 155 aa6.81□□□□□ -1.32
RNF4-212ENST00000509258 NPYP01303 97 aa6.81□□□□□ -1.32
RNF4-212ENST00000509258 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
RNF4-212ENST00000509258 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
RNF4-212ENST00000509258 TRBV24-1A0A075B6N3 115 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 D6R8Y8 96 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 MALP21145 153 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 FCER1GP30273 86 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 PEA15Q15121 130 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
RNF4-212ENST00000509258 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
RNF4-212ENST00000509258 TRAV13-1A0A0B4J241 112 aa6.79□□□□□ -1.32
RNF4-212ENST00000509258 SYCNQ0VAF6 134 aa6.79□□□□□ -1.32
RNF4-212ENST00000509258 Q6ZRP5 223 aa6.79□□□□□ -1.32
RNF4-212ENST00000509258 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
RNF4-212ENST00000509258 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
RNF4-212ENST00000509258 C1orf196B1AJZ1 125 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 TCAPO15273 167 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 APOMO95445 188 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 CKS2P33552 79 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 TMEM18Q96B42 140 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 KIR2DL4Q99706 377 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 SMIM2Q9BVW6 85 aa6.78□□□□□ -1.32
RNF4-212ENST00000509258 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
RNF4-212ENST00000509258 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
RNF4-212ENST00000509258 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
RNF4-212ENST00000509258 RPL32P62910 135 aaKnown RBP6.77□□□□□ -1.33
RNF4-212ENST00000509258 HBBP68871 147 aa6.77□□□□□ -1.33
RNF4-212ENST00000509258 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
RNF4-212ENST00000509258 LINC00862A6NCI5 91 aa6.76□□□□□ -1.33
RNF4-212ENST00000509258 COX7A2LO14548 114 aa6.76□□□□□ -1.33
RNF4-212ENST00000509258 PPP1R2P9O14990 202 aa6.76□□□□□ -1.33
RNF4-212ENST00000509258 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
RNF4-212ENST00000509258 SMDT1Q9H4I9 107 aa6.76□□□□□ -1.33
RNF4-212ENST00000509258 A0A1B0GW15 77 aa6.75□□□□□ -1.33
RNF4-212ENST00000509258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms