RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 CDC42SE2Q9NRR3 84 aa1.42□□□□□ -2.18
CHD1-205ENST00000508756 UQCR10Q9UDW1 63 aa1.42□□□□□ -2.18
CHD1-205ENST00000508756 SHANK2Q9UPX8 1470 aa1.42□□□□□ -2.18
CHD1-205ENST00000508756 GCHFRP30047 84 aa1.41□□□□□ -2.18
CHD1-205ENST00000508756 KRTDAPP60985 99 aa1.41□□□□□ -2.18
CHD1-205ENST00000508756 FAM167A-AS1Q96KT0 104 aa1.41□□□□□ -2.18
CHD1-205ENST00000508756 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
CHD1-205ENST00000508756 PXDNQ92626 1479 aa1.41□□□□□ -2.18
CHD1-205ENST00000508756 MROH2BQ7Z745 1585 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 ANKRD36BQ8N2N9 1353 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 G3V318 75 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 M0R3E3 92 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 TRAPPC2P0DI81 140 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 TRAPPC2BP0DI82 140 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 UBE2D3P61077 147 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 UBE2D2P62837 147 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 BAGE2Q86Y30 109 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 PRO1854Q9UHT4 67 aa1.4□□□□□ -2.19
CHD1-205ENST00000508756 TOP2AP11388 1531 aaKnown RBP1.4□□□□□ -2.19
CHD1-205ENST00000508756 WIZO95785 1651 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 ABCC8Q09428 1581 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 A0A0G2JND7 137 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 APOC3P02656 99 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 LINC00032P0C843 101 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 FXYD6P3P58550 94 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 AMELXQ99217 191 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 ASH1LQ9NR48 2969 aaKnown RBP1.39□□□□□ -2.19
CHD1-205ENST00000508756 KIF21AQ7Z4S6 1674 aa1.39□□□□□ -2.19
CHD1-205ENST00000508756 THOC2Q8NI27 1593 aaKnown RBP1.38□□□□□ -2.19
CHD1-205ENST00000508756 CHD1O14646 1710 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 FAUP35544 74 aaKnown RBP1.38□□□□□ -2.19
CHD1-205ENST00000508756 FAM223AQ8IWN6 122 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 Q9H521 79 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 LINC01558Q9Y6Z2 57 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 TOPAZ1Q8N9V7 1692 aa1.38□□□□□ -2.19
CHD1-205ENST00000508756 FANCD2Q9BXW9 1451 aa1.37□□□□□ -2.19
CHD1-205ENST00000508756 SFT2D2O95562 160 aa1.37□□□□□ -2.19
CHD1-205ENST00000508756 NESP48681 1621 aa1.37□□□□□ -2.19
CHD1-205ENST00000508756 LOC285095A0A1B0GVY8 99 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 IGLC1P0CG04 106 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 ASIPP42127 132 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 ARHGEF5Q12774 1597 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 DNMBPQ6XZF7 1577 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 NXT2Q9NPJ8 142 aaKnown RBP1.36□□□□□ -2.19
CHD1-205ENST00000508756 FAIMQ9NVQ4 179 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 TOP2BQ02880 1626 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 CCDC88BA6NC98 1476 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 TEX14Q8IWB6 1497 aa1.36□□□□□ -2.19
CHD1-205ENST00000508756 CDK13Q14004 1512 aaKnown RBP1.35□□□□□ -2.19
CHD1-205ENST00000508756 ANKRD26Q9UPS8 1709 aa1.35□□□□□ -2.19
CHD1-205ENST00000508756 UQCR11O14957 56 aa1.35□□□□□ -2.19
CHD1-205ENST00000508756 GNG2P59768 71 aa1.35□□□□□ -2.19
CHD1-205ENST00000508756 BTAF1O14981 1849 aa1.35□□□□□ -2.19
CHD1-205ENST00000508756 NMBP08949 121 aa1.34□□□□□ -2.19
CHD1-205ENST00000508756 COX6CP09669 75 aa1.34□□□□□ -2.19
CHD1-205ENST00000508756 FAM103A1Q9BTL3 118 aaKnown RBP1.34□□□□□ -2.19
CHD1-205ENST00000508756 CACFD1Q9UGQ2 172 aa1.34□□□□□ -2.19
CHD1-205ENST00000508756 PLEKHH2Q8IVE3 1493 aa1.34□□□□□ -2.19
CHD1-205ENST00000508756 MAGI1Q96QZ7 1491 aaPredicted RBP1.34□□□□□ -2.19
CHD1-205ENST00000508756 URB2Q14146 1524 aaKnown RBP1.34□□□□□ -2.2
CHD1-205ENST00000508756 TARBP1Q13395 1621 aaKnown RBP1.33□□□□□ -2.2
CHD1-205ENST00000508756 BIVM-ERCC5R4GMW8 1640 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 ZNF462Q96JM2 2506 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 POLA1P09884 1462 aaPredicted RBP1.33□□□□□ -2.2
CHD1-205ENST00000508756 FYCO1Q9BQS8 1478 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 FAM223BA6NKX1 122 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 HAMPP81172 84 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 SMIM4Q8WVI0 70 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 LINC00472Q9H8W2 130 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 ABCA10Q8WWZ4 1543 aa1.33□□□□□ -2.2
CHD1-205ENST00000508756 CADP27708 2225 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 ERICH3Q5RHP9 1530 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 ATOX1O00244 68 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 ABCA5Q8WWZ7 1642 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 MYOM1P52179 1685 aa1.32□□□□□ -2.2
CHD1-205ENST00000508756 GAPVD1Q14C86 1478 aa1.31□□□□□ -2.2
CHD1-205ENST00000508756 CUX1P39880 1505 aa1.31□□□□□ -2.2
CHD1-205ENST00000508756 PRO1933Q9H354 126 aa1.31□□□□□ -2.2
CHD1-205ENST00000508756 SCN7AQ01118 1682 aa1.31□□□□□ -2.2
CHD1-205ENST00000508756 COL4A6Q14031 1691 aa1.31□□□□□ -2.2
CHD1-205ENST00000508756 PRDM15P57071 1507 aaPredicted RBP1.3□□□□□ -2.2
CHD1-205ENST00000508756 CLASP1Q7Z460 1538 aa1.3□□□□□ -2.2
CHD1-205ENST00000508756 ADAMTS12P58397 1594 aa1.3□□□□□ -2.2
CHD1-205ENST00000508756 SERP2Q8N6R1 65 aa1.3□□□□□ -2.2
CHD1-205ENST00000508756 FDCSPQ8NFU4 85 aa1.3□□□□□ -2.2
CHD1-205ENST00000508756 EEA1Q15075 1411 aa1.3□□□□□ -2.2
CHD1-205ENST00000508756 MARF1Q9Y4F3 1742 aaKnown RBP1.29□□□□□ -2.2
CHD1-205ENST00000508756 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 MYO7BQ6PIF6 2116 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 SSBP3-AS1Q7Z2R9 100 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 TRGV9Q99603 122 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 RAPGEF2Q9Y4G8 1499 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 EHBP1L1Q8N3D4 1523 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 KIAA0586Q9BVV6 1533 aa1.29□□□□□ -2.2
CHD1-205ENST00000508756 H7BZZ5 65 aa1.28□□□□□ -2.2
CHD1-205ENST00000508756 C20orf78Q9BR46 151 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms