RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
NEDD9-211ENST00000508546 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 KIF25-AS1Q9Y6Z4 181 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 A0A1B0GW15 77 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 GRIFINA4D1Z8 144 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 SLPIP03973 132 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 S100A8P05109 93 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 S100A6P06703 90 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 TRGC1P0CF51 173 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 CAMPP49913 170 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 RBX1P62877 108 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 RIGQ13278 110 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 TMEM97Q5BJF2 176 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-211ENST00000508546 LYZL1Q6UWQ5 148 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 LINC00269Q8N2A0 174 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 AP5S1Q9NUS5 200 aa5.9□□□□□ -1.46
NEDD9-211ENST00000508546 M0R381 172 aa5.89□□□□□ -1.47
NEDD9-211ENST00000508546 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
NEDD9-211ENST00000508546 REG3GQ6UW15 175 aa5.89□□□□□ -1.47
NEDD9-211ENST00000508546 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
NEDD9-211ENST00000508546 NTM-AS1Q6ZSK4 140 aa5.89□□□□□ -1.47
NEDD9-211ENST00000508546 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 A0A0U1RQV1 116 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 F2Z2F3 143 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 APCSP02743 223 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 GATD1Q8NB37 220 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 SSBP4Q9BWG4 385 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-211ENST00000508546 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
NEDD9-211ENST00000508546 MUC21A0A0G2JKD1 596 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 MUC21A0A140T8X8 626 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 SNAI2O43623 268 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 OR5AL1P0C617 328 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 NDUFA6P56556 154 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 REG3AQ06141 175 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 GAGE6Q13070 117 aa5.87□□□□□ -1.47
NEDD9-211ENST00000508546 IGLV10-54A0A075B6I4 117 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 TRBV25-1A0A075B6N4 114 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 LOC105371267A0A1B0GV96 52 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 C5orf52A6NGY3 159 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 SSTP61278 116 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 SNRPEP62304 92 aaKnown RBP5.86□□□□□ -1.47
NEDD9-211ENST00000508546 CACNG7P62955 275 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 TWIST1Q15672 202 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 ZNF56Q15929 161 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 IQCJQ1A5X6 159 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
NEDD9-211ENST00000508546 A0A1B0GUV1 79 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 NTF3P20783 257 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 COX6A2Q02221 97 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
NEDD9-211ENST00000508546 KIAA1644Q3SXP7 199 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 SPANXN1Q5VSR9 72 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 C20orf203Q8NBC4 194 aa5.85□□□□□ -1.47
NEDD9-211ENST00000508546 IGHV1-24A0A0C4DH33 117 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 MAJINQ3KP22 176 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 COA6Q5JTJ3 125 aaKnown RBP5.84□□□□□ -1.47
NEDD9-211ENST00000508546 SMIM15Q7Z3B0 74 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 AMN1Q8IY45 258 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 STPG4Q8N801 248 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 TMEM191AQ9H0A3 160 aa5.84□□□□□ -1.47
NEDD9-211ENST00000508546 FAM104BQ5XKR9 115 aa5.83□□□□□ -1.48
NEDD9-211ENST00000508546 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
NEDD9-211ENST00000508546 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
NEDD9-211ENST00000508546 AP1S3Q96PC3 154 aa5.83□□□□□ -1.48
NEDD9-211ENST00000508546 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-211ENST00000508546 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 IGKV2-24A0A0C4DH68 120 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 F5H697 171 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 S100A2P29034 98 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 PDZD11Q5EBL8 140 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 BAGE3Q86Y29 109 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 HIST3H2BBQ8N257 126 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 C18orf32Q8TCD1 76 aa5.82□□□□□ -1.48
NEDD9-211ENST00000508546 D6R8Y8 96 aa5.81□□□□□ -1.48
NEDD9-211ENST00000508546 SERF1AO75920 110 aa5.81□□□□□ -1.48
NEDD9-211ENST00000508546 MRPL51Q4U2R6 128 aaKnown RBP5.81□□□□□ -1.48
NEDD9-211ENST00000508546 Q6ZRP5 223 aa5.81□□□□□ -1.48
NEDD9-211ENST00000508546 ORMDL3Q8N138 153 aa5.81□□□□□ -1.48
NEDD9-211ENST00000508546 LINC00474Q9P2X8 69 aa5.81□□□□□ -1.48
NEDD9-211ENST00000508546 A0A096LNI7 61 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 NCR2O95944 276 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 PPBPP02775 128 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 RAB4AP20338 218 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 CKS2P33552 79 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 303.7 ms