RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 FHL2Q14192 279 aa12.52□□□□□ -0.41
SFXN1-208ENST00000507823 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
SFXN1-208ENST00000507823 IGLV5-45A0A087WSX0 123 aa12.51□□□□□ -0.41
SFXN1-208ENST00000507823 LGALS3P17931 250 aaKnown RBP12.51□□□□□ -0.41
SFXN1-208ENST00000507823 TIRAPP58753 221 aa12.51□□□□□ -0.41
SFXN1-208ENST00000507823 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 H3BUT2 72 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 GAGE4Q13068 117 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 GAGE5Q13069 117 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
SFXN1-208ENST00000507823 C12orf74Q32Q52 190 aa12.5□□□□□ -0.41
SFXN1-208ENST00000507823 A0A1W2PPM0 123 aa12.49□□□□□ -0.41
SFXN1-208ENST00000507823 VWFP04275 2813 aa12.49□□□□□ -0.41
SFXN1-208ENST00000507823 SMAGPQ0VAQ4 97 aa12.49□□□□□ -0.41
SFXN1-208ENST00000507823 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
SFXN1-208ENST00000507823 RAB37Q96AX2 223 aa12.49□□□□□ -0.41
SFXN1-208ENST00000507823 H7C423 109 aa12.48□□□□□ -0.41
SFXN1-208ENST00000507823 K7ERJ3 54 aa12.48□□□□□ -0.41
SFXN1-208ENST00000507823 IGHV1-58A0A0C4DH39 117 aa12.48□□□□□ -0.41
SFXN1-208ENST00000507823 IGHV3-30-3P0DP02 117 aa12.47□□□□□ -0.41
SFXN1-208ENST00000507823 TENM1Q9UKZ4 2725 aa12.47□□□□□ -0.41
SFXN1-208ENST00000507823 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
SFXN1-208ENST00000507823 K7EP34 96 aa12.47□□□□□ -0.41
SFXN1-208ENST00000507823 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
SFXN1-208ENST00000507823 TMEM238LA0A1B0GVL6 79 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 A6NJY4 79 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 IGHV3-30P01768 117 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 IGHV3-30-5P0DP03 117 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 LOC100131303A0A0U1RQF7 123 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 IGLL5B9A064 214 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
SFXN1-208ENST00000507823 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
SFXN1-208ENST00000507823 APOC4P55056 127 aa12.44□□□□□ -0.42
SFXN1-208ENST00000507823 C10orf126Q8N4M7 172 aa12.44□□□□□ -0.42
SFXN1-208ENST00000507823 NAA38Q9BRA0 125 aaKnown RBP12.44□□□□□ -0.42
SFXN1-208ENST00000507823 TEP1Q99973 2627 aaKnown RBP12.44□□□□□ -0.42
SFXN1-208ENST00000507823 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
SFXN1-208ENST00000507823 FABP2P12104 132 aa12.43□□□□□ -0.42
SFXN1-208ENST00000507823 GEMIN7Q9H840 131 aaKnown RBP12.43□□□□□ -0.42
SFXN1-208ENST00000507823 HERVK_113P63121 156 aa12.42□□□□□ -0.42
SFXN1-208ENST00000507823 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
SFXN1-208ENST00000507823 TRAV8-3A0A0A6YYJ7 113 aa12.42□□□□□ -0.42
SFXN1-208ENST00000507823 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 A0A0J9YXY3 114 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 ATRQ13535 2644 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 IGLV5-39A0A0G2JS06 123 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 SPCS1Q9Y6A9 102 aa12.41□□□□□ -0.42
SFXN1-208ENST00000507823 F8P00451 2351 aa12.4□□□□□ -0.42
SFXN1-208ENST00000507823 TRBV6-8A0A0A6YYG3 113 aa12.4□□□□□ -0.42
SFXN1-208ENST00000507823 ZFAND6Q6FIF0 208 aa12.4□□□□□ -0.42
SFXN1-208ENST00000507823 DEFB130BP0DP73 79 aa12.4□□□□□ -0.43
SFXN1-208ENST00000507823 DEFB130AP0DP74 79 aa12.4□□□□□ -0.43
SFXN1-208ENST00000507823 COX6A2Q02221 97 aa12.4□□□□□ -0.43
SFXN1-208ENST00000507823 LITAFQ99732 161 aa12.4□□□□□ -0.43
SFXN1-208ENST00000507823 SPINK8P0C7L1 97 aa12.39□□□□□ -0.43
SFXN1-208ENST00000507823 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
SFXN1-208ENST00000507823 UBE2L6O14933 153 aa12.38□□□□□ -0.43
SFXN1-208ENST00000507823 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
SFXN1-208ENST00000507823 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
SFXN1-208ENST00000507823 DEFB135Q30KP9 77 aa12.37□□□□□ -0.43
SFXN1-208ENST00000507823 FAM222AQ5U5X8 452 aa12.37□□□□□ -0.43
SFXN1-208ENST00000507823 PRO0255Q9UI72 69 aa12.37□□□□□ -0.43
SFXN1-208ENST00000507823 TIMM17BO60830 172 aa12.36□□□□□ -0.43
SFXN1-208ENST00000507823 MIFP14174 115 aa12.36□□□□□ -0.43
SFXN1-208ENST00000507823 Q8NAQ8 132 aa12.36□□□□□ -0.43
SFXN1-208ENST00000507823 SPANXDQ9BXN6 97 aa12.36□□□□□ -0.43
SFXN1-208ENST00000507823 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
SFXN1-208ENST00000507823 NDUFA1O15239 70 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 CFC1P0CG37 223 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 F5H768 121 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 TRRAPQ9Y4A5 3859 aa12.35□□□□□ -0.43
SFXN1-208ENST00000507823 RNF183Q96D59 192 aa12.34□□□□□ -0.43
SFXN1-208ENST00000507823 SMIM1B2RUZ4 78 aa12.34□□□□□ -0.43
SFXN1-208ENST00000507823 GYPEP15421 78 aa12.34□□□□□ -0.43
SFXN1-208ENST00000507823 KRTAP24-1Q3LI83 254 aa12.34□□□□□ -0.43
SFXN1-208ENST00000507823 A8MZ25 164 aa12.33□□□□□ -0.44
SFXN1-208ENST00000507823 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
SFXN1-208ENST00000507823 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
SFXN1-208ENST00000507823 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
SFXN1-208ENST00000507823 TRAV13-1A0A0B4J241 112 aa12.33□□□□□ -0.44
SFXN1-208ENST00000507823 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
SFXN1-208ENST00000507823 MUSTN1Q8IVN3 82 aa12.32□□□□□ -0.44
SFXN1-208ENST00000507823 A0A0B4J2C4 111 aa12.32□□□□□ -0.44
SFXN1-208ENST00000507823 TSPAN13O95857 204 aa12.32□□□□□ -0.44
SFXN1-208ENST00000507823 GAGE6Q13070 117 aa12.32□□□□□ -0.44
SFXN1-208ENST00000507823 A4D1N5 150 aa12.31□□□□□ -0.44
SFXN1-208ENST00000507823 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
SFXN1-208ENST00000507823 IGLV4-60A0A075B6I1 120 aa12.3□□□□□ -0.44
SFXN1-208ENST00000507823 MIAQ16674 131 aa12.3□□□□□ -0.44
SFXN1-208ENST00000507823 APOMO95445 188 aa12.3□□□□□ -0.44
SFXN1-208ENST00000507823 ADAMTSL4-AS1Q5T5F5 129 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms