RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RAB4AP20338 218 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 TMEM241Q24JQ0 296 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 NAT8BQ9UHF3 227 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 A0A1B0GW15 77 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 PANO1I0J062 215 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 TCAPO15273 167 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 TSHBP01222 138 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 FOXI1Q12951 378 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 SMDT1Q9H4I9 107 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 TMEM242Q9NWH2 141 aa9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
HMGCS1-203ENST00000507004 FCER1GP30273 86 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 COX6A2Q02221 97 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 V9GYV3 84 aa9.17□□□□□ -0.94
HMGCS1-203ENST00000507004 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 XCL1P47992 114 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 NUP35Q8NFH5 326 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 ISOC2Q96AB3 205 aa9.16□□□□□ -0.94
HMGCS1-203ENST00000507004 C1orf196B1AJZ1 125 aa9.15□□□□□ -0.94
HMGCS1-203ENST00000507004 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.94
HMGCS1-203ENST00000507004 S100A8P05109 93 aa9.15□□□□□ -0.94
HMGCS1-203ENST00000507004 PEA15Q15121 130 aa9.15□□□□□ -0.94
HMGCS1-203ENST00000507004 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
HMGCS1-203ENST00000507004 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
HMGCS1-203ENST00000507004 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
HMGCS1-203ENST00000507004 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-203ENST00000507004 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
HMGCS1-203ENST00000507004 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
HMGCS1-203ENST00000507004 SMIM27A0A1W2PRY6 76 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 MALP21145 153 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 ADIRFQ15847 76 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 STPG4Q8N801 248 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 NRACQ8N912 160 aa9.12□□□□□ -0.95
HMGCS1-203ENST00000507004 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 F8W036 122 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 COX7A2LO14548 114 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 APOMO95445 188 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 HNRNPA3P51991 378 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-203ENST00000507004 PHOX2AO14813 284 aa9.1□□□□□ -0.95
HMGCS1-203ENST00000507004 CKS2P33552 79 aa9.1□□□□□ -0.95
HMGCS1-203ENST00000507004 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
HMGCS1-203ENST00000507004 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
HMGCS1-203ENST00000507004 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
HMGCS1-203ENST00000507004 PPBPP02775 128 aa9.09□□□□□ -0.95
HMGCS1-203ENST00000507004 CAMPP49913 170 aa9.09□□□□□ -0.95
HMGCS1-203ENST00000507004 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-203ENST00000507004 A0A096LNI7 61 aa9.08□□□□□ -0.96
HMGCS1-203ENST00000507004 F8WDY8 70 aa9.08□□□□□ -0.96
HMGCS1-203ENST00000507004 SMKR1H3BMG3 65 aa9.08□□□□□ -0.96
HMGCS1-203ENST00000507004 HBBP68871 147 aa9.08□□□□□ -0.96
HMGCS1-203ENST00000507004 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
HMGCS1-203ENST00000507004 IGLV4-69A0A075B6H9 119 aa9.07□□□□□ -0.96
HMGCS1-203ENST00000507004 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
HMGCS1-203ENST00000507004 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
HMGCS1-203ENST00000507004 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
HMGCS1-203ENST00000507004 PRR3P79522 188 aaKnown RBP9.06□□□□□ -0.96
HMGCS1-203ENST00000507004 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
HMGCS1-203ENST00000507004 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
HMGCS1-203ENST00000507004 SMIM2Q9BVW6 85 aa9.06□□□□□ -0.96
HMGCS1-203ENST00000507004 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
HMGCS1-203ENST00000507004 RNF151Q2KHN1 245 aa9.05□□□□□ -0.96
HMGCS1-203ENST00000507004 C9JQL5 133 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 PTTG1IPP53801 180 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 SPINK6Q6UWN8 80 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 Q6ZRP5 223 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
HMGCS1-203ENST00000507004 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 D6R8Y8 96 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 MT1HL1P0DM35 61 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 RAB5AP20339 215 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 REG3GQ6UW15 175 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 Q6ZUT4 128 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
HMGCS1-203ENST00000507004 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
HMGCS1-203ENST00000507004 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
HMGCS1-203ENST00000507004 LAMTOR2Q9Y2Q5 125 aa9.02□□□□□ -0.97
HMGCS1-203ENST00000507004 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
HMGCS1-203ENST00000507004 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms