RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 A4D1N5 150 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 CCL25O15444 150 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 IGLL5B9A064 214 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 TAL2Q16559 108 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 K7EP13 123 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 COX7A2LO14548 114 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 CCL18P55774 89 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 ZNF580Q9UK33 172 aa10.3□□□□□ -0.76
TCOF1-207ENST00000504761 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 TRBV27A0A0K0K1C4 114 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 SCGB1A1P11684 91 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 USP34Q70CQ2 3546 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
TCOF1-207ENST00000504761 MUC3AQ02505 3323 aa10.28□□□□□ -0.76
TCOF1-207ENST00000504761 RS1O15537 224 aa10.28□□□□□ -0.76
TCOF1-207ENST00000504761 PCP4P48539 62 aa10.28□□□□□ -0.76
TCOF1-207ENST00000504761 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
TCOF1-207ENST00000504761 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
TCOF1-207ENST00000504761 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.76
TCOF1-207ENST00000504761 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.77
TCOF1-207ENST00000504761 C1orf158Q8N1D5 194 aa10.27□□□□□ -0.77
TCOF1-207ENST00000504761 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
TCOF1-207ENST00000504761 IGHV4-30-4P0DP06 118 aa10.27□□□□□ -0.77
TCOF1-207ENST00000504761 TSPAN13O95857 204 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 LYRM9A8MSI8 78 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 TSHBP01222 138 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 CFC1P0CG37 223 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
TCOF1-207ENST00000504761 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 CAMK2N2Q96S95 79 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 C16orf95Q9H693 158 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 A8MZ25 164 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 K7EP34 96 aa10.25□□□□□ -0.77
TCOF1-207ENST00000504761 TACC2O95359 2948 aa10.24□□□□□ -0.77
TCOF1-207ENST00000504761 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
TCOF1-207ENST00000504761 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
TCOF1-207ENST00000504761 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
TCOF1-207ENST00000504761 MIFP14174 115 aa10.24□□□□□ -0.77
TCOF1-207ENST00000504761 TRBV6-4A0A1B0GX49 114 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 ZNF22P17026 224 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-207ENST00000504761 NKAPP1Q8N9T2 125 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 GTSF1LQ9H1H1 148 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 UNC79Q9P2D8 2635 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
TCOF1-207ENST00000504761 HERV-K104P63124 156 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 LURAP1LQ8IV03 231 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 Q8N2B8 174 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 RETNQ9HD89 108 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
TCOF1-207ENST00000504761 TAX1BP3O14907 124 aa10.21□□□□□ -0.77
TCOF1-207ENST00000504761 RMI2Q96E14 147 aa10.21□□□□□ -0.77
TCOF1-207ENST00000504761 REG3AQ06141 175 aa10.21□□□□□ -0.78
TCOF1-207ENST00000504761 KALRNO60229 2985 aa10.2□□□□□ -0.78
TCOF1-207ENST00000504761 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
TCOF1-207ENST00000504761 TEX15Q9BXT5 2789 aa10.2□□□□□ -0.78
TCOF1-207ENST00000504761 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
TCOF1-207ENST00000504761 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
TCOF1-207ENST00000504761 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
TCOF1-207ENST00000504761 GCN1Q92616 2671 aaKnown RBP10.19□□□□□ -0.78
TCOF1-207ENST00000504761 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
TCOF1-207ENST00000504761 FSHBP01225 129 aa10.19□□□□□ -0.78
TCOF1-207ENST00000504761 OCIAD2Q56VL3 154 aa10.19□□□□□ -0.78
TCOF1-207ENST00000504761 RBX1P62877 108 aa10.19□□□□□ -0.78
TCOF1-207ENST00000504761 RBMY1FQ15415 496 aaKnown RBP10.19□□□□□ -0.78
TCOF1-207ENST00000504761 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
TCOF1-207ENST00000504761 Q6ZSN1 163 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 A0A096LNT2 108 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 A0A0J9YXY3 114 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 KIR2DL5BQ8NHK3 375 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 IFITM1P13164 125 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
TCOF1-207ENST00000504761 A0A096LNJ9 63 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 GHRHP01286 108 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 CARD19Q96LW7 228 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
TCOF1-207ENST00000504761 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-207ENST00000504761 LRBAP50851 2863 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
TCOF1-207ENST00000504761 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms