RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
CPNE1-228ENST00000498814 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
CPNE1-228ENST00000498814 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
CPNE1-228ENST00000498814 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
CPNE1-228ENST00000498814 TRAPPC1Q9Y5R8 145 aa10.32□□□□□ -0.76
CPNE1-228ENST00000498814 DGAT2L7PQ6IED9 249 aa10.31□□□□□ -0.76
CPNE1-228ENST00000498814 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
CPNE1-228ENST00000498814 CDC42SE2Q9NRR3 84 aa10.31□□□□□ -0.76
CPNE1-228ENST00000498814 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
CPNE1-228ENST00000498814 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
CPNE1-228ENST00000498814 ZNF664Q8N3J9 261 aa10.3□□□□□ -0.76
CPNE1-228ENST00000498814 BIRC6Q9NR09 4857 aa10.3□□□□□ -0.76
CPNE1-228ENST00000498814 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
CPNE1-228ENST00000498814 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-228ENST00000498814 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
CPNE1-228ENST00000498814 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
CPNE1-228ENST00000498814 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
CPNE1-228ENST00000498814 WFDC2Q14508 124 aa10.28□□□□□ -0.76
CPNE1-228ENST00000498814 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
CPNE1-228ENST00000498814 SPANXA1Q9NS26 97 aa10.28□□□□□ -0.76
CPNE1-228ENST00000498814 PGPEP1Q9NXJ5 209 aa10.28□□□□□ -0.76
CPNE1-228ENST00000498814 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
CPNE1-228ENST00000498814 Q8N814 137 aa10.27□□□□□ -0.77
CPNE1-228ENST00000498814 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
CPNE1-228ENST00000498814 LINC01546A6NGU7 62 aa10.26□□□□□ -0.77
CPNE1-228ENST00000498814 LECT2O14960 151 aa10.26□□□□□ -0.77
CPNE1-228ENST00000498814 MRPS36P82909 103 aaKnown RBP10.26□□□□□ -0.77
CPNE1-228ENST00000498814 CDPF1Q6NVV7 123 aa10.26□□□□□ -0.77
CPNE1-228ENST00000498814 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
CPNE1-228ENST00000498814 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 G0S2P27469 103 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 Q6ZUT4 128 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-228ENST00000498814 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-228ENST00000498814 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
CPNE1-228ENST00000498814 C16orf90A8MZG2 172 aa10.24□□□□□ -0.77
CPNE1-228ENST00000498814 CCL25O15444 150 aa10.24□□□□□ -0.77
CPNE1-228ENST00000498814 SS18Q15532 418 aa10.24□□□□□ -0.77
CPNE1-228ENST00000498814 DYNC1H1Q14204 4646 aaKnown RBP10.23□□□□□ -0.77
CPNE1-228ENST00000498814 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
CPNE1-228ENST00000498814 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
CPNE1-228ENST00000498814 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
CPNE1-228ENST00000498814 C18orf32Q8TCD1 76 aa10.23□□□□□ -0.77
CPNE1-228ENST00000498814 COLCA2A8K830 154 aa10.22□□□□□ -0.77
CPNE1-228ENST00000498814 USP17L23D6RBM5 183 aa10.22□□□□□ -0.77
CPNE1-228ENST00000498814 FA2HQ7L5A8 372 aa10.22□□□□□ -0.77
CPNE1-228ENST00000498814 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-228ENST00000498814 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
CPNE1-228ENST00000498814 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
CPNE1-228ENST00000498814 NPSP0C0P6 89 aa10.21□□□□□ -0.77
CPNE1-228ENST00000498814 FUSP35637 526 aaKnown RBP eCLIP10.21□□□□□ -0.77
CPNE1-228ENST00000498814 TOMM6Q96B49 74 aa10.21□□□□□ -0.77
CPNE1-228ENST00000498814 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 IGLV5-52A0A0A0MRZ9 124 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 IGIPA6NJ69 53 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 XCL1P47992 114 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 FOXI1Q12951 378 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
CPNE1-228ENST00000498814 TRAV13-1A0A0B4J241 112 aa10.19□□□□□ -0.78
CPNE1-228ENST00000498814 LINC00614P0C842 121 aa10.19□□□□□ -0.78
CPNE1-228ENST00000498814 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
CPNE1-228ENST00000498814 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
CPNE1-228ENST00000498814 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
CPNE1-228ENST00000498814 SCO1O75880 301 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 TRGC2P03986 189 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 PRSS1P07477 247 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 RAB5BP61020 215 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 CFAP161Q6P656 301 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
CPNE1-228ENST00000498814 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
CPNE1-228ENST00000498814 GCSHP23434 173 aa10.17□□□□□ -0.78
CPNE1-228ENST00000498814 Q6ZN92 141 aa10.17□□□□□ -0.78
CPNE1-228ENST00000498814 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
CPNE1-228ENST00000498814 ERASQ7Z444 233 aa10.17□□□□□ -0.78
CPNE1-228ENST00000498814 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 AMELXQ99217 191 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 VCX2Q9H322 139 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
CPNE1-228ENST00000498814 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
CPNE1-228ENST00000498814 hDV102S1A0JD36 115 aa10.14□□□□□ -0.79
CPNE1-228ENST00000498814 COX7A2LO14548 114 aa10.14□□□□□ -0.79
CPNE1-228ENST00000498814 S100A1P23297 94 aa10.14□□□□□ -0.79
CPNE1-228ENST00000498814 C2orf88Q9BSF0 95 aa10.14□□□□□ -0.79
CPNE1-228ENST00000498814 A0A096LNJ9 63 aa10.13□□□□□ -0.79
CPNE1-228ENST00000498814 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
CPNE1-228ENST00000498814 UBE2D1P51668 147 aa10.13□□□□□ -0.79
CPNE1-228ENST00000498814 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
CPNE1-228ENST00000498814 CHCHD1Q96BP2 118 aaKnown RBP10.13□□□□□ -0.79
CPNE1-228ENST00000498814 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
CPNE1-228ENST00000498814 IGHV3OR16-9A0A0B4J2B5 98 aa10.12□□□□□ -0.79
CPNE1-228ENST00000498814 HBDP02042 147 aa10.12□□□□□ -0.79
CPNE1-228ENST00000498814 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
CPNE1-228ENST00000498814 ZC2HC1BQ5TFG8 222 aa10.12□□□□□ -0.79
CPNE1-228ENST00000498814 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms