RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 WFDC2Q14508 124 aa7.44□□□□□ -1.22
ERCC8-208ENST00000497892 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
ERCC8-208ENST00000497892 Q8N814 137 aa7.44□□□□□ -1.22
ERCC8-208ENST00000497892 C20orf78Q9BR46 151 aa7.44□□□□□ -1.22
ERCC8-208ENST00000497892 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
ERCC8-208ENST00000497892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.43□□□□□ -1.22
ERCC8-208ENST00000497892 IGKV2-29A2NJV5 120 aaPredicted RBP7.43□□□□□ -1.22
ERCC8-208ENST00000497892 VCYO14598 125 aa7.43□□□□□ -1.22
ERCC8-208ENST00000497892 TNFRSF6BO95407 300 aa7.43□□□□□ -1.22
ERCC8-208ENST00000497892 FUSP35637 526 aaKnown RBP eCLIP7.43□□□□□ -1.22
ERCC8-208ENST00000497892 RPL32P62910 135 aaKnown RBP7.43□□□□□ -1.22
ERCC8-208ENST00000497892 NTN5Q8WTR8 489 aaPredicted RBP7.43□□□□□ -1.22
ERCC8-208ENST00000497892 TRAV9-1A0A075B6T8 112 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 PHOX2AO14813 284 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 LECT2O14960 151 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 FGF6P10767 208 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 ZNF25P17030 456 aaPredicted RBP7.42□□□□□ -1.22
ERCC8-208ENST00000497892 AMMECR1LQ6DCA0 310 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 BAALCQ8WXS3 180 aa7.42□□□□□ -1.22
ERCC8-208ENST00000497892 HERC2O95714 4834 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 C7orf77A4D0Y5 90 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 NPYP01303 97 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 FCER1GP30273 86 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 RHEBQ15382 184 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 KIR2DL4Q99706 377 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
ERCC8-208ENST00000497892 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 CDK2AP2O75956 126 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
ERCC8-208ENST00000497892 TMEM136Q6ZRR5 245 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 MRPL52Q86TS9 123 aaKnown RBP7.4□□□□□ -1.22
ERCC8-208ENST00000497892 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
ERCC8-208ENST00000497892 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
ERCC8-208ENST00000497892 TCAPO15273 167 aa7.39□□□□□ -1.23
ERCC8-208ENST00000497892 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
ERCC8-208ENST00000497892 S100PP25815 95 aa7.39□□□□□ -1.23
ERCC8-208ENST00000497892 OR5A1Q8NGJ0 315 aa7.38□□□□□ -1.23
ERCC8-208ENST00000497892 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
ERCC8-208ENST00000497892 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
ERCC8-208ENST00000497892 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
ERCC8-208ENST00000497892 RYR1P21817 5038 aa7.38□□□□□ -1.23
ERCC8-208ENST00000497892 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.37□□□□□ -1.23
ERCC8-208ENST00000497892 USP17L23D6RBM5 183 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 APOC3P02656 99 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 GCSHP23434 173 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 NDUFA5Q16718 116 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 C14orf177Q52M58 125 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
ERCC8-208ENST00000497892 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
ERCC8-208ENST00000497892 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 PRSS47A8MTI9 375 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 SVBPQ8N300 66 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 HSPG2P98160 4391 aa7.36□□□□□ -1.23
ERCC8-208ENST00000497892 SNAPINO95295 136 aa7.35□□□□□ -1.23
ERCC8-208ENST00000497892 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
ERCC8-208ENST00000497892 DGAT2L7PQ6IED9 249 aa7.35□□□□□ -1.23
ERCC8-208ENST00000497892 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
ERCC8-208ENST00000497892 TMEM18Q96B42 140 aa7.35□□□□□ -1.23
ERCC8-208ENST00000497892 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
ERCC8-208ENST00000497892 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
ERCC8-208ENST00000497892 RAB5AP20339 215 aa7.34□□□□□ -1.23
ERCC8-208ENST00000497892 COX19Q49B96 90 aa7.34□□□□□ -1.23
ERCC8-208ENST00000497892 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
ERCC8-208ENST00000497892 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 MT-ND6P03923 174 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 PRSS1P07477 247 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
ERCC8-208ENST00000497892 Q6ZUT4 128 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 Q8N8P6 123 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
ERCC8-208ENST00000497892 K7EMI3 77 aa7.32□□□□□ -1.24
ERCC8-208ENST00000497892 FOXI1Q12951 378 aa7.32□□□□□ -1.24
ERCC8-208ENST00000497892 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
ERCC8-208ENST00000497892 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
ERCC8-208ENST00000497892 CCL25O15444 150 aa7.31□□□□□ -1.24
ERCC8-208ENST00000497892 XCL1P47992 114 aa7.31□□□□□ -1.24
ERCC8-208ENST00000497892 MRPS36P82909 103 aaKnown RBP7.31□□□□□ -1.24
ERCC8-208ENST00000497892 SS18Q15532 418 aa7.31□□□□□ -1.24
ERCC8-208ENST00000497892 RNASE13Q5GAN3 156 aaKnown RBP7.31□□□□□ -1.24
ERCC8-208ENST00000497892 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
ERCC8-208ENST00000497892 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
ERCC8-208ENST00000497892 TGIF2-C20orf24A0A0A6YYL0 155 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
ERCC8-208ENST00000497892 XGP55808 180 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 LINC01620Q4KN68 170 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 Q6ZSA8 131 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms