RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 D6R8Y8 96 aa13.39□□□□□ -0.27
COL9A2-211ENST00000496215 CHCHD10Q8WYQ3 142 aaPredicted RBP13.39□□□□□ -0.27
COL9A2-211ENST00000496215 ANAPC16Q96DE5 110 aa13.39□□□□□ -0.27
COL9A2-211ENST00000496215 C20orf78Q9BR46 151 aa13.39□□□□□ -0.27
COL9A2-211ENST00000496215 MYCBP2O75592 4640 aa13.38□□□□□ -0.27
COL9A2-211ENST00000496215 TRBV24-1A0A075B6N3 115 aa13.38□□□□□ -0.27
COL9A2-211ENST00000496215 IFITM2Q01629 132 aa13.38□□□□□ -0.27
COL9A2-211ENST00000496215 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
COL9A2-211ENST00000496215 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
COL9A2-211ENST00000496215 SCXQ7RTU7 201 aa13.37□□□□□ -0.27
COL9A2-211ENST00000496215 PPBPP02775 128 aa13.36□□□□□ -0.27
COL9A2-211ENST00000496215 CNBPP62633 177 aaKnown RBP13.36□□□□□ -0.27
COL9A2-211ENST00000496215 RPL32P62910 135 aaKnown RBP13.36□□□□□ -0.27
COL9A2-211ENST00000496215 UQCC3Q6UW78 93 aa13.36□□□□□ -0.27
COL9A2-211ENST00000496215 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
COL9A2-211ENST00000496215 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
COL9A2-211ENST00000496215 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
COL9A2-211ENST00000496215 TCAPO15273 167 aa13.35□□□□□ -0.27
COL9A2-211ENST00000496215 CFAP161Q6P656 301 aa13.35□□□□□ -0.27
COL9A2-211ENST00000496215 C15orf56Q8N910 161 aa13.35□□□□□ -0.27
COL9A2-211ENST00000496215 C9orf163Q8N9P6 203 aa13.35□□□□□ -0.27
COL9A2-211ENST00000496215 CDC42SE2Q9NRR3 84 aa13.35□□□□□ -0.27
COL9A2-211ENST00000496215 PHOX2AO14813 284 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 NPYP01303 97 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 ORMDL3Q8N138 153 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 HERC1Q15751 4861 aa13.34□□□□□ -0.27
COL9A2-211ENST00000496215 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-211ENST00000496215 LINC00959A0A1B0GUT2 108 aa13.33□□□□□ -0.28
COL9A2-211ENST00000496215 CCL25O15444 150 aa13.33□□□□□ -0.28
COL9A2-211ENST00000496215 XCL1P47992 114 aa13.33□□□□□ -0.28
COL9A2-211ENST00000496215 LINC00528Q8N1L1 170 aa13.33□□□□□ -0.28
COL9A2-211ENST00000496215 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
COL9A2-211ENST00000496215 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
COL9A2-211ENST00000496215 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
COL9A2-211ENST00000496215 FOXI1Q12951 378 aa13.32□□□□□ -0.28
COL9A2-211ENST00000496215 SS18Q15532 418 aa13.32□□□□□ -0.28
COL9A2-211ENST00000496215 CSDC2Q9Y534 153 aaKnown RBP13.32□□□□□ -0.28
COL9A2-211ENST00000496215 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
COL9A2-211ENST00000496215 PRELID3AQ96N28 172 aa13.31□□□□□ -0.28
COL9A2-211ENST00000496215 TMEM218A2RU14 115 aa13.3□□□□□ -0.28
COL9A2-211ENST00000496215 HIGD2BQ4VC39 106 aa13.3□□□□□ -0.28
COL9A2-211ENST00000496215 TMEM136Q6ZRR5 245 aa13.3□□□□□ -0.28
COL9A2-211ENST00000496215 IGHV3-64A0A075B6Q5 118 aa13.29□□□□□ -0.28
COL9A2-211ENST00000496215 Q6ZUT4 128 aa13.29□□□□□ -0.28
COL9A2-211ENST00000496215 TIMM21Q9BVV7 248 aa13.29□□□□□ -0.28
COL9A2-211ENST00000496215 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-211ENST00000496215 PLA2G1BP04054 148 aaKnown RBP13.28□□□□□ -0.28
COL9A2-211ENST00000496215 RNASE13Q5GAN3 156 aaKnown RBP13.28□□□□□ -0.28
COL9A2-211ENST00000496215 COMMD7Q86VX2 200 aa13.28□□□□□ -0.28
COL9A2-211ENST00000496215 FLG2Q5D862 2391 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-211ENST00000496215 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
COL9A2-211ENST00000496215 CD164L2Q6UWJ8 174 aa13.27□□□□□ -0.29
COL9A2-211ENST00000496215 LAMTOR2Q9Y2Q5 125 aa13.27□□□□□ -0.29
COL9A2-211ENST00000496215 SLPIP03973 132 aa13.26□□□□□ -0.29
COL9A2-211ENST00000496215 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
COL9A2-211ENST00000496215 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
COL9A2-211ENST00000496215 SEC11CQ9BY50 192 aa13.26□□□□□ -0.29
COL9A2-211ENST00000496215 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
COL9A2-211ENST00000496215 C1orf196B1AJZ1 125 aa13.25□□□□□ -0.29
COL9A2-211ENST00000496215 RAB5AP20339 215 aa13.25□□□□□ -0.29
COL9A2-211ENST00000496215 CTDSP1Q9GZU7 261 aa13.25□□□□□ -0.29
COL9A2-211ENST00000496215 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
COL9A2-211ENST00000496215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-211ENST00000496215 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
COL9A2-211ENST00000496215 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
COL9A2-211ENST00000496215 PANO1I0J062 215 aa13.22□□□□□ -0.29
COL9A2-211ENST00000496215 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
COL9A2-211ENST00000496215 COX7A2LO14548 114 aa13.21□□□□□ -0.29
COL9A2-211ENST00000496215 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
COL9A2-211ENST00000496215 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
COL9A2-211ENST00000496215 MALP21145 153 aa13.2□□□□□ -0.3
COL9A2-211ENST00000496215 CIRBPQ14011 172 aaKnown RBP13.2□□□□□ -0.3
COL9A2-211ENST00000496215 DMBT1Q9UGM3 2413 aaPredicted RBP13.2□□□□□ -0.3
COL9A2-211ENST00000496215 S100PP25815 95 aa13.19□□□□□ -0.3
COL9A2-211ENST00000496215 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-211ENST00000496215 KRTAP10-4P60372 401 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-211ENST00000496215 MRPS36P82909 103 aaKnown RBP13.19□□□□□ -0.3
COL9A2-211ENST00000496215 ZNF561-AS1K7EIQ3 104 aa13.18□□□□□ -0.3
COL9A2-211ENST00000496215 CHTF8P0CG12 524 aa13.18□□□□□ -0.3
COL9A2-211ENST00000496215 Q8N8P6 123 aa13.18□□□□□ -0.3
COL9A2-211ENST00000496215 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
COL9A2-211ENST00000496215 IFITM10A6NMD0 228 aa13.17□□□□□ -0.3
COL9A2-211ENST00000496215 COX6A2Q02221 97 aa13.17□□□□□ -0.3
COL9A2-211ENST00000496215 FAM104AQ969W3 186 aa13.17□□□□□ -0.3
COL9A2-211ENST00000496215 LINC00526Q96FQ7 95 aa13.17□□□□□ -0.3
COL9A2-211ENST00000496215 CARD19Q96LW7 228 aa13.17□□□□□ -0.3
COL9A2-211ENST00000496215 OPRPNQ99935 248 aaPredicted RBP13.17□□□□□ -0.3
COL9A2-211ENST00000496215 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
COL9A2-211ENST00000496215 RHEBQ15382 184 aa13.15□□□□□ -0.3
COL9A2-211ENST00000496215 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
COL9A2-211ENST00000496215 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
COL9A2-211ENST00000496215 CYSLTR1Q9Y271 337 aa13.15□□□□□ -0.3
COL9A2-211ENST00000496215 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
COL9A2-211ENST00000496215 PYGO1Q9Y3Y4 419 aa13.15□□□□□ -0.3
COL9A2-211ENST00000496215 K7EMI3 77 aa13.14□□□□□ -0.31
COL9A2-211ENST00000496215 APOMO95445 188 aa13.14□□□□□ -0.31
COL9A2-211ENST00000496215 RPL37AP61513 92 aaKnown RBP13.14□□□□□ -0.31
COL9A2-211ENST00000496215 ORMDL2Q53FV1 153 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms