RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TAS2R45P59539 299 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 HBG1P69891 147 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 HBG2P69892 147 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 CTAG1AP78358 180 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 SPANXN1Q5VSR9 72 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 IMMP2LQ96T52 175 aa4.69□□□□□ -1.66
GARNL3-219ENST00000495172 WDR61Q9GZS3 305 aaKnown RBP4.69□□□□□ -1.66
GARNL3-219ENST00000495172 MRPL35Q9NZE8 188 aaKnown RBP4.69□□□□□ -1.66
GARNL3-219ENST00000495172 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 SMIM17P0DL12 118 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 NTF3P20783 257 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 ATP6V1FQ16864 119 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 STX12Q86Y82 276 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 LINC00469Q8N7U9 141 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 Q8NBF4 154 aa4.68□□□□□ -1.66
GARNL3-219ENST00000495172 H3BMQ9 156 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 CTRLP40313 264 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 SPAG11AQ6PDA7 123 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 RASL11AQ6T310 242 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 FUNDC2Q9BWH2 189 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 MED28Q9H204 178 aa4.67□□□□□ -1.66
GARNL3-219ENST00000495172 GAGE10A6NGK3 116 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 G3V3Q6 166 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 OR5AL1P0C617 328 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 RAB32Q13637 225 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 ORAOV1Q8WV07 137 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 AP3S1Q92572 193 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 MARVELD1Q9BSK0 173 aa4.66□□□□□ -1.66
GARNL3-219ENST00000495172 SNAI2O43623 268 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 UBE2AP49459 152 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 PRLHP81277 87 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 PQLC2Q6ZP29 291 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 Q8N377 158 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 AP1S3Q96PC3 154 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 SLC25A21Q9BQT8 299 aaPredicted RBP4.65□□□□□ -1.67
GARNL3-219ENST00000495172 NIT2Q9NQR4 276 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 ALG5Q9Y673 324 aa4.65□□□□□ -1.67
GARNL3-219ENST00000495172 NDUFA1O15239 70 aa4.64□□□□□ -1.67
GARNL3-219ENST00000495172 XAGE1AQ9HD64 81 aa4.64□□□□□ -1.67
GARNL3-219ENST00000495172 CDC42SE2Q9NRR3 84 aa4.64□□□□□ -1.67
GARNL3-219ENST00000495172 TRAV13-1A0A0B4J241 112 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 C17orf112F2Z3M2 114 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 APCSP02743 223 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 GCHFRP30047 84 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 C2orf82Q6UX34 121 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
GARNL3-219ENST00000495172 TMEM101Q96IK0 257 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 BTF3L4Q96K17 158 aa4.63□□□□□ -1.67
GARNL3-219ENST00000495172 A0A1W2PPV4 95 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 B5MCH6 92 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 LGALS3P17931 250 aaKnown RBP4.62□□□□□ -1.67
GARNL3-219ENST00000495172 PVALBP20472 110 aaPredicted RBP4.62□□□□□ -1.67
GARNL3-219ENST00000495172 FAUP35544 74 aaKnown RBP4.62□□□□□ -1.67
GARNL3-219ENST00000495172 UBE2G2P60604 165 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 MRPL55Q7Z7F7 128 aaKnown RBP4.62□□□□□ -1.67
GARNL3-219ENST00000495172 TOMM5Q8N4H5 51 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 LINC00167Q96N53 147 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 TPPP3Q9BW30 176 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 KCNIP2Q9NS61 270 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 NDUFA12Q9UI09 145 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 RAB26Q9ULW5 256 aa4.62□□□□□ -1.67
GARNL3-219ENST00000495172 PEX7O00628 323 aa4.61□□□□□ -1.67
GARNL3-219ENST00000495172 ATP6V1G2O95670 118 aa4.61□□□□□ -1.67
GARNL3-219ENST00000495172 MRPS26Q9BYN8 205 aaKnown RBP4.61□□□□□ -1.67
GARNL3-219ENST00000495172 SMIM3Q9BZL3 60 aa4.61□□□□□ -1.67
GARNL3-219ENST00000495172 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
GARNL3-219ENST00000495172 SCO1O75880 301 aa4.6□□□□□ -1.67
GARNL3-219ENST00000495172 ZNF25P17030 456 aaPredicted RBP4.6□□□□□ -1.67
GARNL3-219ENST00000495172 LBHQ53QV2 105 aaPredicted RBP4.6□□□□□ -1.67
GARNL3-219ENST00000495172 COX8CQ7Z4L0 72 aa4.6□□□□□ -1.67
GARNL3-219ENST00000495172 GATD1Q8NB37 220 aa4.6□□□□□ -1.67
GARNL3-219ENST00000495172 PLEKHB2Q96CS7 222 aa4.6□□□□□ -1.67
GARNL3-219ENST00000495172 C1orf196B1AJZ1 125 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 H7C423 109 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 STAG3L2P0CL84 134 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 STAG3L3P0CL85 134 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 FOXA3P55318 350 aaPredicted RBP4.59□□□□□ -1.67
GARNL3-219ENST00000495172 IL15RAQ13261 267 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 OR10D4PQ8NGN7 298 aa4.59□□□□□ -1.67
GARNL3-219ENST00000495172 NDUFB6O95139 128 aa4.58□□□□□ -1.68
GARNL3-219ENST00000495172 SPINK1P00995 79 aa4.58□□□□□ -1.68
GARNL3-219ENST00000495172 TMEM241Q24JQ0 296 aa4.58□□□□□ -1.68
GARNL3-219ENST00000495172 PACRGQ96M98 296 aaPredicted RBP4.58□□□□□ -1.68
GARNL3-219ENST00000495172 RNASE7Q9H1E1 156 aaKnown RBP4.58□□□□□ -1.68
GARNL3-219ENST00000495172 CDC34P49427 236 aaPredicted RBP4.57□□□□□ -1.68
GARNL3-219ENST00000495172 PNRC1Q12796 327 aaPredicted RBP4.57□□□□□ -1.68
GARNL3-219ENST00000495172 KIAA0087Q14695 138 aa4.57□□□□□ -1.68
GARNL3-219ENST00000495172 RAB24Q969Q5 203 aa4.57□□□□□ -1.68
GARNL3-219ENST00000495172 SEC22CQ9BRL7 303 aa4.57□□□□□ -1.68
GARNL3-219ENST00000495172 VCX3BQ9H321 246 aa4.57□□□□□ -1.68
GARNL3-219ENST00000495172 TMEM242Q9NWH2 141 aa4.57□□□□□ -1.68
GARNL3-219ENST00000495172 IGKV2-28A0A075B6P5 120 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 H0YIZ8 118 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 IGKV2D-28P01615 120 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 PYDC2Q56P42 97 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 Q6ZUT4 128 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 RBM38Q9H0Z9 239 aaKnown RBP4.56□□□□□ -1.68
GARNL3-219ENST00000495172 ZFP30Q9Y2G7 519 aa4.56□□□□□ -1.68
GARNL3-219ENST00000495172 SDHAF1A6NFY7 115 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms