RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 K7EMI3 77 aa8.27□□□□□ -1.08
TRA2A-209ENST00000494255 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.08
TRA2A-209ENST00000494255 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.08
TRA2A-209ENST00000494255 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.08
TRA2A-209ENST00000494255 BAALCQ8WXS3 180 aa8.27□□□□□ -1.08
TRA2A-209ENST00000494255 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
TRA2A-209ENST00000494255 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
TRA2A-209ENST00000494255 LECT2O14960 151 aa8.26□□□□□ -1.09
TRA2A-209ENST00000494255 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
TRA2A-209ENST00000494255 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
TRA2A-209ENST00000494255 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 G0S2P27469 103 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 CDPF1Q6NVV7 123 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 Q8N814 137 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 CYSLTR1Q9Y271 337 aa8.25□□□□□ -1.09
TRA2A-209ENST00000494255 WFDC2Q14508 124 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 SS18Q15532 418 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 Q6ZUT4 128 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
TRA2A-209ENST00000494255 NTN5Q8WTR8 489 aaPredicted RBP8.24□□□□□ -1.09
TRA2A-209ENST00000494255 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
TRA2A-209ENST00000494255 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
TRA2A-209ENST00000494255 RNASE13Q5GAN3 156 aaKnown RBP8.23□□□□□ -1.09
TRA2A-209ENST00000494255 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
TRA2A-209ENST00000494255 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
TRA2A-209ENST00000494255 CCL25O15444 150 aa8.22□□□□□ -1.09
TRA2A-209ENST00000494255 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
TRA2A-209ENST00000494255 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.09
TRA2A-209ENST00000494255 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.09
TRA2A-209ENST00000494255 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.09
TRA2A-209ENST00000494255 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.09
TRA2A-209ENST00000494255 XCL1P47992 114 aa8.21□□□□□ -1.09
TRA2A-209ENST00000494255 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
TRA2A-209ENST00000494255 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
TRA2A-209ENST00000494255 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
TRA2A-209ENST00000494255 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
TRA2A-209ENST00000494255 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
TRA2A-209ENST00000494255 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
TRA2A-209ENST00000494255 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
TRA2A-209ENST00000494255 Q6ZN92 141 aa8.2□□□□□ -1.1
TRA2A-209ENST00000494255 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
TRA2A-209ENST00000494255 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 RAB5BP61020 215 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 FOXI1Q12951 378 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 TOMM6Q96B49 74 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
TRA2A-209ENST00000494255 NPSP0C0P6 89 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 LINC00614P0C842 121 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 GCSHP23434 173 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 COLCA2A8K830 154 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 SCO1O75880 301 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 TIMM17AQ99595 171 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 C2orf88Q9BSF0 95 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 VCX2Q9H322 139 aa8.18□□□□□ -1.1
TRA2A-209ENST00000494255 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
TRA2A-209ENST00000494255 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
TRA2A-209ENST00000494255 IGIPA6NJ69 53 aa8.17□□□□□ -1.1
TRA2A-209ENST00000494255 TRGC2P03986 189 aa8.17□□□□□ -1.1
TRA2A-209ENST00000494255 PRSS1P07477 247 aa8.17□□□□□ -1.1
TRA2A-209ENST00000494255 ERASQ7Z444 233 aa8.17□□□□□ -1.1
TRA2A-209ENST00000494255 COX7A2LO14548 114 aa8.16□□□□□ -1.1
TRA2A-209ENST00000494255 PKD1P98161 4303 aa8.16□□□□□ -1.1
TRA2A-209ENST00000494255 MALP21145 153 aa8.15□□□□□ -1.1
TRA2A-209ENST00000494255 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 S100A1P23297 94 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 C15orf56Q8N910 161 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 AMELXQ99217 191 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 HBDP02042 147 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
TRA2A-209ENST00000494255 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
TRA2A-209ENST00000494255 GVQW2A0A096LPI5 108 aaPredicted RBP8.13□□□□□ -1.11
TRA2A-209ENST00000494255 APOMO95445 188 aa8.13□□□□□ -1.11
TRA2A-209ENST00000494255 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
TRA2A-209ENST00000494255 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
TRA2A-209ENST00000494255 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
TRA2A-209ENST00000494255 C5orf38Q86SI9 138 aa8.13□□□□□ -1.11
TRA2A-209ENST00000494255 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
TRA2A-209ENST00000494255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.12□□□□□ -1.11
TRA2A-209ENST00000494255 UBE2D1P51668 147 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms