RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 TRBV7-1A0A0A6YYK4 115 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 F8WDY8 70 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 LINC00694P0DN24 101 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 HERVK_113P63121 156 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 LINC01620Q4KN68 170 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 PVRIGQ6DKI7 326 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-234ENST00000493923 NTN5Q8WTR8 489 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-234ENST00000493923 TTTY13Q9BZ97 58 aa5.98□□□□□ -1.45
HDAC6-234ENST00000493923 IGHV3-49A0A0A0MS15 119 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 CTSGP08311 255 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 IGLC6P0CF74 106 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 CRYGAP11844 174 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 ANXA2RQ3ZCQ2 193 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 GAGE2AQ6NT46 116 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 ZFP2Q6ZN57 461 aa5.97□□□□□ -1.45
HDAC6-234ENST00000493923 SRSF8Q9BRL6 282 aaKnown RBP5.97□□□□□ -1.45
HDAC6-234ENST00000493923 TRBV19A0A075B6N1 114 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3OR16-13A0A075B7E8 117 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 TMSB15BA0A087X1C1 80 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3-74A0A0B4J1X5 117 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 F5H768 121 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 I3L2K1 104 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 ATOX1O00244 68 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 SH2D1AO60880 128 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 PPP1R17O96001 155 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 ORM1P02763 201 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 COX6CP09669 75 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 COX7CP15954 63 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
HDAC6-234ENST00000493923 LINC00643Q86TS7 51 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 RNF185Q96GF1 192 aa5.96□□□□□ -1.46
HDAC6-234ENST00000493923 MRPL36Q9P0J6 103 aaKnown RBP5.96□□□□□ -1.46
HDAC6-234ENST00000493923 IGLV2-18A0A075B6J9 118 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 TRBV30A0A0K0K1B3 111 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 CFC1BP0CG36 223 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 CFC1P0CG37 223 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 RPL35AP18077 110 aaKnown RBP5.95□□□□□ -1.46
HDAC6-234ENST00000493923 DEFB135Q30KP9 77 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 WFDC3Q8IUB2 231 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 APRG1Q8IVJ8 170 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 IL17DQ8TAD2 202 aa5.95□□□□□ -1.46
HDAC6-234ENST00000493923 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 IGKV3-7A0A075B6H7 116 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 FAM236AA0A1B0GUQ0 79 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 FAM236BA0A1B0GV22 79 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 NDUFA4O00483 81 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3-30P01768 117 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 TRACP01848 142 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 CRYGDP07320 174 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3-30-5P0DP03 117 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 ZNF56Q15929 161 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 MLANAQ16655 118 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 C2orf82Q6UX34 121 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 SIGLEC15Q6ZMC9 328 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 Q6ZQT7 251 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 SCGB3A1Q96QR1 104 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 CHCHD5Q9BSY4 110 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
HDAC6-234ENST00000493923 DAZ1Q9NQZ3 744 aaKnown RBP5.94□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3-66A0A0C4DH42 116 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV7-4-1A0A0J9YVY3 117 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 A0A0J9YY99 117 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 SMKR1H3BMG3 65 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 H3BRN7 92 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 K7EMT4 169 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV3-33P01772 117 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 CRIP1P50238 77 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 FXYD7P58549 80 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 POM121L12Q8N7R1 296 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 NEXN-AS1Q8NBZ9 246 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 KIR2DL5BQ8NHK3 375 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 SLC50A1Q9BRV3 221 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 RHPN1-AS1Q9BWJ2 59 aa5.93□□□□□ -1.46
HDAC6-234ENST00000493923 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 SPRY2O43597 315 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 LYZP61626 148 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 Q1RN00 199 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 EXOC3-AS1Q8N2X6 119 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 LINC00476Q8WZB0 136 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 SMIM2Q9BVW6 85 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 MAP6D1Q9H9H5 199 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
HDAC6-234ENST00000493923 A0A0J9YX75 114 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 C11orf86A6NJI1 115 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 M0R381 172 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 MRPS12O15235 138 aaKnown RBP5.91□□□□□ -1.46
HDAC6-234ENST00000493923 ERCC8Q13216 396 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 TMEM263Q8WUH6 116 aaKnown RBP5.91□□□□□ -1.46
HDAC6-234ENST00000493923 TMEM141Q96I45 108 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 HERC2O95714 4834 aa5.91□□□□□ -1.46
HDAC6-234ENST00000493923 IGHV4-4A0A075B6R2 117 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 RBAKDNA6NC62 111 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 DEFB4AO15263 64 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-234ENST00000493923 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms