RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 A0A1B0GUV1 79 aa15.07■□□□□ 0
PSPC1-204ENST00000492741 RNASE13Q5GAN3 156 aaKnown RBP15.07■□□□□ 0
PSPC1-204ENST00000492741 VCX2Q9H322 139 aa15.07■□□□□ 0
PSPC1-204ENST00000492741 CSMD3Q7Z407 3707 aa15.07■□□□□ 0
PSPC1-204ENST00000492741 IGLV4-60A0A075B6I1 120 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 C3orf79P0CE67 100 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 Q6ZUT4 128 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 BAALCQ8WXS3 180 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 IGHV3-30P01768 117 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 IGHV3-33P01772 117 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 NPSP0C0P6 89 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 IGHV3-30-3P0DP02 117 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 IGHV3-30-5P0DP03 117 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 ZNF664Q8N3J9 261 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 Q8N3U1 123 aa15.06■□□□□ 0
PSPC1-204ENST00000492741 C3orf84H3BNL1 204 aa15.05■□□□□ -0
PSPC1-204ENST00000492741 ANGP03950 147 aaKnown RBP15.05■□□□□ -0
PSPC1-204ENST00000492741 AKR1D1P51857 326 aa15.05■□□□□ -0
PSPC1-204ENST00000492741 MRPS36P82909 103 aaKnown RBP15.05■□□□□ -0
PSPC1-204ENST00000492741 TEX43Q6ZNM6 134 aa15.05■□□□□ -0
PSPC1-204ENST00000492741 CDC42SE2Q9NRR3 84 aa15.05■□□□□ -0
PSPC1-204ENST00000492741 CASC10Q5T4H9 136 aa15.04■□□□□ -0
PSPC1-204ENST00000492741 ZC2HC1BQ5TFG8 222 aa15.04■□□□□ -0
PSPC1-204ENST00000492741 SYS1-DBNDD2H3BUS1 97 aa15.03■□□□□ -0
PSPC1-204ENST00000492741 SIVA1O15304 175 aa15.03■□□□□ -0
PSPC1-204ENST00000492741 PMVKQ15126 192 aa15.03■□□□□ -0
PSPC1-204ENST00000492741 UPK3BQ9BT76 320 aa15.03■□□□□ -0
PSPC1-204ENST00000492741 FAM104AQ969W3 186 aa15.02□□□□□ -0.01
PSPC1-204ENST00000492741 C2orf88Q9BSF0 95 aa15.02□□□□□ -0.01
PSPC1-204ENST00000492741 IGKV3OR2-268A0A0C4DH90 116 aa15.01□□□□□ -0.01
PSPC1-204ENST00000492741 Q9H8V8 135 aa15.01□□□□□ -0.01
PSPC1-204ENST00000492741 LOC105371267A0A1B0GV96 52 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 PRSS29PA6NIE9 313 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 CST9LQ9H4G1 147 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 DYNC2H1Q8NCM8 4307 aaKnown RBP15□□□□□ -0.01
PSPC1-204ENST00000492741 LINC01556Q5JQF7 62 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 PET117Q6UWS5 81 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 LINC00269Q8N2A0 174 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 AMELXQ99217 191 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 KLK12Q9UKR0 248 aa15□□□□□ -0.01
PSPC1-204ENST00000492741 DNAH10OSP0CZ25 163 aa14.99□□□□□ -0.01
PSPC1-204ENST00000492741 CLPSL2Q6UWE3 100 aa14.99□□□□□ -0.01
PSPC1-204ENST00000492741 TRAV12-1A0A0B4J245 112 aa14.98□□□□□ -0.01
PSPC1-204ENST00000492741 TRAV13-1A0A0B4J241 112 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 C20orf202A1L168 122 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 SPATA12Q7Z6I5 190 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 CHTOPQ9Y3Y2 248 aaKnown RBP14.97□□□□□ -0.01
PSPC1-204ENST00000492741 STARD9Q9P2P6 4700 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 SCGB1D1O95968 90 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 PMCHL2Q9BQD1 86 aa14.97□□□□□ -0.01
PSPC1-204ENST00000492741 REG3AQ06141 175 aa14.95□□□□□ -0.02
PSPC1-204ENST00000492741 ODF1Q14990 250 aa14.95□□□□□ -0.02
PSPC1-204ENST00000492741 CRPP02741 224 aa14.95□□□□□ -0.02
PSPC1-204ENST00000492741 LGALS9CQ6DKI2 356 aa14.95□□□□□ -0.02
PSPC1-204ENST00000492741 TRAV9-2A0A087WT02 112 aa14.94□□□□□ -0.02
PSPC1-204ENST00000492741 LINC01545Q5VT33 79 aa14.94□□□□□ -0.02
PSPC1-204ENST00000492741 UBE2WQ96B02 151 aa14.94□□□□□ -0.02
PSPC1-204ENST00000492741 MRPL35Q9NZE8 188 aaKnown RBP14.94□□□□□ -0.02
PSPC1-204ENST00000492741 F8VRH5 84 aa14.93□□□□□ -0.02
PSPC1-204ENST00000492741 UBE2D1P51668 147 aa14.92□□□□□ -0.02
PSPC1-204ENST00000492741 TENM2Q9NT68 2774 aa14.92□□□□□ -0.02
PSPC1-204ENST00000492741 A0A0J9YXV3 536 aa14.92□□□□□ -0.02
PSPC1-204ENST00000492741 LINC00959A0A1B0GUT2 108 aa14.92□□□□□ -0.02
PSPC1-204ENST00000492741 SS18Q15532 418 aa14.92□□□□□ -0.02
PSPC1-204ENST00000492741 JOSD1Q15040 202 aaPredicted RBP14.91□□□□□ -0.02
PSPC1-204ENST00000492741 C10orf126Q8N4M7 172 aa14.91□□□□□ -0.02
PSPC1-204ENST00000492741 PLECQ15149 4684 aaKnown RBP14.9□□□□□ -0.02
PSPC1-204ENST00000492741 ENHOQ6UWT2 76 aa14.9□□□□□ -0.02
PSPC1-204ENST00000492741 PRR34Q9NV39 138 aa14.9□□□□□ -0.02
PSPC1-204ENST00000492741 DPM2O94777 84 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 LY6G6CO95867 125 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
PSPC1-204ENST00000492741 LYSTQ99698 3801 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 IGLV10-54A0A075B6I4 117 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 IGKCP01834 107 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 PLNP26678 52 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 SEC11AP67812 179 aa14.89□□□□□ -0.03
PSPC1-204ENST00000492741 IGLV4-69A0A075B6H9 119 aa14.88□□□□□ -0.03
PSPC1-204ENST00000492741 ATOH7Q8N100 152 aa14.88□□□□□ -0.03
PSPC1-204ENST00000492741 TINCRA0A1B0GVN0 87 aa14.87□□□□□ -0.03
PSPC1-204ENST00000492741 K7EP13 123 aa14.87□□□□□ -0.03
PSPC1-204ENST00000492741 PYY3Q5JQD4 70 aa14.87□□□□□ -0.03
PSPC1-204ENST00000492741 LINC00242Q5T6M2 205 aa14.87□□□□□ -0.03
PSPC1-204ENST00000492741 CHAC1Q9BUX1 264 aa14.87□□□□□ -0.03
PSPC1-204ENST00000492741 CCL25O15444 150 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 IGLC3P0DOY3 106 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 MIAQ16674 131 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 Q9HAA7 133 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 C11orf86A6NJI1 115 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 IBA57-AS1B1ANH7 110 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 XCL1P47992 114 aa14.86□□□□□ -0.03
PSPC1-204ENST00000492741 HERVK_113P63121 156 aa14.85□□□□□ -0.03
PSPC1-204ENST00000492741 TMEM170BQ5T4T1 132 aa14.85□□□□□ -0.03
PSPC1-204ENST00000492741 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
PSPC1-204ENST00000492741 TRAV8-3A0A0A6YYJ7 113 aa14.84□□□□□ -0.03
PSPC1-204ENST00000492741 TRAV8-4A0A0B4J246 113 aa14.84□□□□□ -0.03
PSPC1-204ENST00000492741 COX6A2Q02221 97 aa14.84□□□□□ -0.03
PSPC1-204ENST00000492741 NFE4Q86UQ8 179 aa14.84□□□□□ -0.03
PSPC1-204ENST00000492741 LINC00469Q8N7U9 141 aa14.84□□□□□ -0.03
PSPC1-204ENST00000492741 TTC32Q5I0X7 151 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms