RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 AMMECR1LQ6DCA0 310 aa5.27□□□□□ -1.57
SMARCB1-207ENST00000491967 PRSS3P2Q8NHM4 247 aa5.27□□□□□ -1.57
SMARCB1-207ENST00000491967 MRAP2Q96G30 205 aa5.27□□□□□ -1.57
SMARCB1-207ENST00000491967 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
SMARCB1-207ENST00000491967 CSDC2Q9Y534 153 aaKnown RBP5.27□□□□□ -1.57
SMARCB1-207ENST00000491967 C9JQL5 133 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 PMCHP20382 165 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 RNASEKQ6P5S7 137 aaKnown RBP5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 NRACQ8N912 160 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 SMIM7Q9BQ49 75 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 ST20Q9HBF5 79 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 V9GYV3 84 aa5.26□□□□□ -1.57
SMARCB1-207ENST00000491967 ZNF727A8MUV8 499 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 VCYO14598 125 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 CCL25O15444 150 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 HIGD2BQ4VC39 106 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 CD164L2Q6UWJ8 174 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 COMMD7Q86VX2 200 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 ZNF664Q8N3J9 261 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 NUP35Q8NFH5 326 aa5.25□□□□□ -1.57
SMARCB1-207ENST00000491967 A0A096LNI7 61 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 IGHV1-58A0A0C4DH39 117 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 IGKV3OR2-268A0A0C4DH90 116 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 PHOX2AO14813 284 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 PPP1R17O96001 155 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 RPL32P62910 135 aaKnown RBP5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 FAM74A3Q4VXF1 159 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 AMN1Q8IY45 258 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 ISOC2Q96AB3 205 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 BORCS7Q96B45 105 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 DPH3Q96FX2 82 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 BTF3L4Q96K17 158 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 TMEM242Q9NWH2 141 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 LINC00474Q9P2X8 69 aa5.24□□□□□ -1.57
SMARCB1-207ENST00000491967 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 SMIM27A0A1W2PRY6 76 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 C7orf77A4D0Y5 90 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 LINC00862A6NCI5 91 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 XCL1P47992 114 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 SRSF9Q13242 221 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 RIGQ13278 110 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 TMEM241Q24JQ0 296 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 MAJINQ3KP22 176 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 LINC01600Q96MT4 127 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 TIMM21Q9BVV7 248 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 SMDT1Q9H4I9 107 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 PLA2G2DQ9UNK4 145 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
SMARCB1-207ENST00000491967 C1orf196B1AJZ1 125 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 SUMO2P61956 95 aaKnown RBP5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 RPL23P62829 140 aaKnown RBP5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 SS18Q15532 418 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 FAM104BQ5XKR9 115 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 UQCC3Q6UW78 93 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 STPG4Q8N801 248 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 C20orf78Q9BR46 151 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 NAT8BQ9UHF3 227 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 PKIGQ9Y2B9 76 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 TNXBP22105 4242 aa5.22□□□□□ -1.57
SMARCB1-207ENST00000491967 IGKV2-24A0A0C4DH68 120 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 PPP1R2P9O14990 202 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 SYCNQ0VAF6 134 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 MRPL51Q4U2R6 128 aaKnown RBP5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 SLC7A5P1Q8MH63 180 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 LINC00526Q96FQ7 95 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 CARD19Q96LW7 228 aa5.21□□□□□ -1.58
SMARCB1-207ENST00000491967 A0A1B0GW15 77 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 TMEM218A2RU14 115 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 SMKR1H3BMG3 65 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 PTTG1IPP53801 180 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 KIR2DL4Q99706 377 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 NAT8Q9UHE5 227 aa5.2□□□□□ -1.58
SMARCB1-207ENST00000491967 IGLV4-69A0A075B6H9 119 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 F8W036 122 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 ZNF561-AS1K7EIQ3 104 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 COX7A2LO14548 114 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 TCAPO15273 167 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 CAMPP49913 170 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 SMAGPQ0VAQ4 97 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 ADIRFQ15847 76 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
SMARCB1-207ENST00000491967 IGHV3OR16-9A0A0B4J2B5 98 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 A0A0J9YXV3 536 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 LOC107984640A0A0U1RRK4 108 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 F8WDY8 70 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 ADCYAP1P18509 176 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 FCER1GP30273 86 aa5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 MRPS36P82909 103 aaKnown RBP5.18□□□□□ -1.58
SMARCB1-207ENST00000491967 A0A1W2PNN7 141 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms