RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TRBV24-1A0A075B6N3 115 aa10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 IGKV2-29A2NJV5 120 aaPredicted RBP10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 PHOX2AO14813 284 aa10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
PDLIM2-217ENST00000491330 ESDP10768 282 aa10.71□□□□□ -0.69
PDLIM2-217ENST00000491330 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
PDLIM2-217ENST00000491330 SS18Q15532 418 aa10.71□□□□□ -0.69
PDLIM2-217ENST00000491330 CHCHD10Q8WYQ3 142 aaPredicted RBP10.71□□□□□ -0.69
PDLIM2-217ENST00000491330 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
PDLIM2-217ENST00000491330 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
PDLIM2-217ENST00000491330 C7orf77A4D0Y5 90 aa10.7□□□□□ -0.7
PDLIM2-217ENST00000491330 CAMPP49913 170 aa10.7□□□□□ -0.7
PDLIM2-217ENST00000491330 MRPL52Q86TS9 123 aaKnown RBP10.7□□□□□ -0.7
PDLIM2-217ENST00000491330 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
PDLIM2-217ENST00000491330 CKS2P33552 79 aa10.69□□□□□ -0.7
PDLIM2-217ENST00000491330 RPS10P46783 165 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-217ENST00000491330 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-217ENST00000491330 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
PDLIM2-217ENST00000491330 NRACQ8N912 160 aa10.69□□□□□ -0.7
PDLIM2-217ENST00000491330 CCL25O15444 150 aa10.68□□□□□ -0.7
PDLIM2-217ENST00000491330 TSHBP01222 138 aa10.68□□□□□ -0.7
PDLIM2-217ENST00000491330 IMMP2LQ96T52 175 aa10.68□□□□□ -0.7
PDLIM2-217ENST00000491330 TMEM242Q9NWH2 141 aa10.68□□□□□ -0.7
PDLIM2-217ENST00000491330 LAMTOR2Q9Y2Q5 125 aa10.67□□□□□ -0.7
PDLIM2-217ENST00000491330 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-217ENST00000491330 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
PDLIM2-217ENST00000491330 XCL1P47992 114 aa10.66□□□□□ -0.7
PDLIM2-217ENST00000491330 MRPL54Q6P161 138 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-217ENST00000491330 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
PDLIM2-217ENST00000491330 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 OXTP01178 125 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 ORMDL3Q8N138 153 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 TIMM21Q9BVV7 248 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 CTDSP1Q9GZU7 261 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.7
PDLIM2-217ENST00000491330 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 C1orf196B1AJZ1 125 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 MALP21145 153 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 IFITM2Q01629 132 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 ZNF664Q8N3J9 261 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 SEC11CQ9BY50 192 aa10.64□□□□□ -0.71
PDLIM2-217ENST00000491330 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
PDLIM2-217ENST00000491330 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
PDLIM2-217ENST00000491330 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
PDLIM2-217ENST00000491330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
PDLIM2-217ENST00000491330 GVQW2A0A096LPI5 108 aaPredicted RBP10.62□□□□□ -0.71
PDLIM2-217ENST00000491330 D6R8Y8 96 aa10.62□□□□□ -0.71
PDLIM2-217ENST00000491330 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
PDLIM2-217ENST00000491330 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
PDLIM2-217ENST00000491330 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
PDLIM2-217ENST00000491330 FOXI1Q12951 378 aa10.61□□□□□ -0.71
PDLIM2-217ENST00000491330 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
PDLIM2-217ENST00000491330 C15orf56Q8N910 161 aa10.61□□□□□ -0.71
PDLIM2-217ENST00000491330 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
PDLIM2-217ENST00000491330 K7EMI3 77 aa10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 APOMO95445 188 aa10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 COX6A2Q02221 97 aa10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 FLG2Q5D862 2391 aaPredicted RBP10.6□□□□□ -0.71
PDLIM2-217ENST00000491330 A0A087WYN8 130 aa10.59□□□□□ -0.71
PDLIM2-217ENST00000491330 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
PDLIM2-217ENST00000491330 PRELID3AQ96N28 172 aa10.59□□□□□ -0.71
PDLIM2-217ENST00000491330 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
PDLIM2-217ENST00000491330 UBE2D4Q9Y2X8 147 aa10.59□□□□□ -0.71
PDLIM2-217ENST00000491330 COX7A2LO14548 114 aa10.58□□□□□ -0.72
PDLIM2-217ENST00000491330 RAB5AP20339 215 aa10.58□□□□□ -0.72
PDLIM2-217ENST00000491330 COX19Q49B96 90 aa10.58□□□□□ -0.72
PDLIM2-217ENST00000491330 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
PDLIM2-217ENST00000491330 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
PDLIM2-217ENST00000491330 IGKV2-24A0A0C4DH68 120 aa10.57□□□□□ -0.72
PDLIM2-217ENST00000491330 NPYP01303 97 aa10.57□□□□□ -0.72
PDLIM2-217ENST00000491330 SLPIP03973 132 aa10.57□□□□□ -0.72
PDLIM2-217ENST00000491330 S100PP25815 95 aa10.57□□□□□ -0.72
PDLIM2-217ENST00000491330 MAP1LC3AQ9H492 121 aa10.57□□□□□ -0.72
PDLIM2-217ENST00000491330 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 ADCYAP1P18509 176 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 G0S2P27469 103 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 MRPS36P82909 103 aaKnown RBP10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 SYCNQ0VAF6 134 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 PLAC8Q9NZF1 115 aa10.56□□□□□ -0.72
PDLIM2-217ENST00000491330 FAT1Q14517 4588 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 DNAH8Q96JB1 4490 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 RHEBQ15382 184 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 STPG4Q8N801 248 aa10.55□□□□□ -0.72
PDLIM2-217ENST00000491330 NPSP0C0P6 89 aa10.54□□□□□ -0.72
PDLIM2-217ENST00000491330 Q6ZRU5 148 aa10.54□□□□□ -0.72
PDLIM2-217ENST00000491330 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
PDLIM2-217ENST00000491330 CARHSP1Q9Y2V2 147 aaKnown RBP10.54□□□□□ -0.72
PDLIM2-217ENST00000491330 PYGO1Q9Y3Y4 419 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms