RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
TRA2A-208ENST00000490942 DNAH10Q8IVF4 4471 aa10.58□□□□□ -0.72
TRA2A-208ENST00000490942 NPSP0C0P6 89 aa10.58□□□□□ -0.72
TRA2A-208ENST00000490942 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
TRA2A-208ENST00000490942 Q9HAA7 133 aa10.58□□□□□ -0.72
TRA2A-208ENST00000490942 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
TRA2A-208ENST00000490942 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
TRA2A-208ENST00000490942 MRPS36P82909 103 aaKnown RBP10.57□□□□□ -0.72
TRA2A-208ENST00000490942 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
TRA2A-208ENST00000490942 C18orf32Q8TCD1 76 aa10.57□□□□□ -0.72
TRA2A-208ENST00000490942 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
TRA2A-208ENST00000490942 CCL25O15444 150 aa10.56□□□□□ -0.72
TRA2A-208ENST00000490942 PSCAO43653 123 aa10.56□□□□□ -0.72
TRA2A-208ENST00000490942 RAB5BP61020 215 aa10.56□□□□□ -0.72
TRA2A-208ENST00000490942 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
TRA2A-208ENST00000490942 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
TRA2A-208ENST00000490942 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
TRA2A-208ENST00000490942 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
TRA2A-208ENST00000490942 TRGC2P03986 189 aa10.54□□□□□ -0.72
TRA2A-208ENST00000490942 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
TRA2A-208ENST00000490942 TNP2Q05952 138 aa10.54□□□□□ -0.72
TRA2A-208ENST00000490942 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
TRA2A-208ENST00000490942 EREGO14944 169 aa10.53□□□□□ -0.72
TRA2A-208ENST00000490942 SCO1O75880 301 aa10.53□□□□□ -0.72
TRA2A-208ENST00000490942 LINC00614P0C842 121 aa10.53□□□□□ -0.72
TRA2A-208ENST00000490942 A0A087WTM6 91 aa10.52□□□□□ -0.73
TRA2A-208ENST00000490942 A0A1B0GVY2 172 aa10.52□□□□□ -0.73
TRA2A-208ENST00000490942 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
TRA2A-208ENST00000490942 TOMM6Q96B49 74 aa10.52□□□□□ -0.73
TRA2A-208ENST00000490942 FAT2Q9NYQ8 4349 aa10.51□□□□□ -0.73
TRA2A-208ENST00000490942 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
TRA2A-208ENST00000490942 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
TRA2A-208ENST00000490942 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
TRA2A-208ENST00000490942 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
TRA2A-208ENST00000490942 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
TRA2A-208ENST00000490942 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 SS18Q15532 418 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 Q6ZUT4 128 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 URB1-AS1Q96HZ7 61 aa10.5□□□□□ -0.73
TRA2A-208ENST00000490942 C1orf196B1AJZ1 125 aa10.49□□□□□ -0.73
TRA2A-208ENST00000490942 ERASQ7Z444 233 aa10.49□□□□□ -0.73
TRA2A-208ENST00000490942 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
TRA2A-208ENST00000490942 TMEM141Q96I45 108 aa10.49□□□□□ -0.73
TRA2A-208ENST00000490942 FRAS1Q86XX4 4008 aa10.49□□□□□ -0.73
TRA2A-208ENST00000490942 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
TRA2A-208ENST00000490942 Q6ZN92 141 aa10.48□□□□□ -0.73
TRA2A-208ENST00000490942 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
TRA2A-208ENST00000490942 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
TRA2A-208ENST00000490942 C14orf177Q52M58 125 aa10.47□□□□□ -0.73
TRA2A-208ENST00000490942 CDPF1Q6NVV7 123 aa10.47□□□□□ -0.73
TRA2A-208ENST00000490942 CD164L2Q6UWJ8 174 aa10.47□□□□□ -0.73
TRA2A-208ENST00000490942 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
TRA2A-208ENST00000490942 AMELXQ99217 191 aa10.47□□□□□ -0.73
TRA2A-208ENST00000490942 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 HBDP02042 147 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 BAGE3Q86Y29 109 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 C2orf88Q9BSF0 95 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
TRA2A-208ENST00000490942 Q8N814 137 aa10.45□□□□□ -0.74
TRA2A-208ENST00000490942 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
TRA2A-208ENST00000490942 OPRPNQ99935 248 aaPredicted RBP10.45□□□□□ -0.74
TRA2A-208ENST00000490942 VCX2Q9H322 139 aa10.45□□□□□ -0.74
TRA2A-208ENST00000490942 A0A096LNJ9 63 aa10.44□□□□□ -0.74
TRA2A-208ENST00000490942 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
TRA2A-208ENST00000490942 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
TRA2A-208ENST00000490942 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
TRA2A-208ENST00000490942 TRAV13-1A0A0B4J241 112 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 HSBP1O75506 76 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 XCL1P47992 114 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 FOXI1Q12951 378 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
TRA2A-208ENST00000490942 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
TRA2A-208ENST00000490942 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
TRA2A-208ENST00000490942 ATP5LO75964 103 aa10.42□□□□□ -0.74
TRA2A-208ENST00000490942 SEC11AP67812 179 aa10.42□□□□□ -0.74
TRA2A-208ENST00000490942 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
TRA2A-208ENST00000490942 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 UBE2D1P51668 147 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 WFDC2Q14508 124 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
TRA2A-208ENST00000490942 SPATA12Q7Z6I5 190 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
TRA2A-208ENST00000490942 IGHV3OR16-9A0A0B4J2B5 98 aa10.4□□□□□ -0.74
TRA2A-208ENST00000490942 COX7A2LO14548 114 aa10.39□□□□□ -0.75
TRA2A-208ENST00000490942 SERF1AO75920 110 aa10.39□□□□□ -0.75
TRA2A-208ENST00000490942 PMVKQ15126 192 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms