RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SPAG11BQ08648 103 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 GATD1Q8NB37 220 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 OR2D3Q8NGH3 330 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 STOML3Q8TAV4 291 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 CTXND1A0A1B0GTU2 59 aa7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 CST9LP1Q5W188 147 aa7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 C5orf38Q86SI9 138 aa7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 MRPL35Q9NZE8 188 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-207ENST00000490516 G3V3Q6 166 aa7.8□□□□□ -1.16
EXOSC3-207ENST00000490516 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
EXOSC3-207ENST00000490516 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
EXOSC3-207ENST00000490516 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
EXOSC3-207ENST00000490516 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
EXOSC3-207ENST00000490516 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
EXOSC3-207ENST00000490516 TCEAL7Q9BRU2 100 aa7.79□□□□□ -1.16
EXOSC3-207ENST00000490516 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
EXOSC3-207ENST00000490516 C1orf196B1AJZ1 125 aa7.78□□□□□ -1.16
EXOSC3-207ENST00000490516 FHITP49789 147 aa7.78□□□□□ -1.16
EXOSC3-207ENST00000490516 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
EXOSC3-207ENST00000490516 MZT2BQ6NZ67 158 aa7.78□□□□□ -1.16
EXOSC3-207ENST00000490516 SMDT1Q9H4I9 107 aa7.78□□□□□ -1.16
EXOSC3-207ENST00000490516 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
EXOSC3-207ENST00000490516 UNQ6190/PRO20217Q6UXQ8 127 aa7.77□□□□□ -1.17
EXOSC3-207ENST00000490516 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
EXOSC3-207ENST00000490516 ALG5Q9Y673 324 aa7.77□□□□□ -1.17
EXOSC3-207ENST00000490516 SCO2A0A1W2PP80 73 aa7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 NDUFA1O15239 70 aa7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 NUPR1O60356 82 aa7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 S100A9P06702 114 aaKnown RBP7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 RNASE13Q5GAN3 156 aaKnown RBP7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 CCDC32Q9BV29 185 aa7.76□□□□□ -1.17
EXOSC3-207ENST00000490516 TRAV13-1A0A0B4J241 112 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 PAGE4O60829 102 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 PMCHP20382 165 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 RPL28P46779 137 aaKnown RBP7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 OR10D4PQ8NGN7 298 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 ORAOV1Q8WV07 137 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 MRAP2Q96G30 205 aa7.75□□□□□ -1.17
EXOSC3-207ENST00000490516 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 F2Z2F3 143 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 I3L3M4 83 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 LINC00242Q5T6M2 205 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
EXOSC3-207ENST00000490516 TMEM241Q24JQ0 296 aa7.73□□□□□ -1.17
EXOSC3-207ENST00000490516 CTRLP40313 264 aa7.72□□□□□ -1.17
EXOSC3-207ENST00000490516 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-207ENST00000490516 F8WDY8 70 aa7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 SSNA1O43805 119 aa7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 TWIST1Q15672 202 aa7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 RPL7L1Q6DKI1 246 aaKnown RBP7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 FP248Q71RG6 208 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 RNASE7Q9H1E1 156 aaKnown RBP7.71□□□□□ -1.18
EXOSC3-207ENST00000490516 BCE1O60756 84 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 CTAG1AP78358 180 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 AKR1C8PQ5T2L2 129 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 TMUB2Q71RG4 321 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
EXOSC3-207ENST00000490516 IGKV2D-26A0A0A0MRZ7 120 aa7.69□□□□□ -1.18
EXOSC3-207ENST00000490516 ENKURQ8TC29 256 aa7.69□□□□□ -1.18
EXOSC3-207ENST00000490516 C7orf77A4D0Y5 90 aa7.68□□□□□ -1.18
EXOSC3-207ENST00000490516 IFNA1P01562 189 aa7.68□□□□□ -1.18
EXOSC3-207ENST00000490516 RPL35P42766 123 aaKnown RBP7.68□□□□□ -1.18
EXOSC3-207ENST00000490516 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
EXOSC3-207ENST00000490516 C9orf62Q8N4C0 152 aa7.67□□□□□ -1.18
EXOSC3-207ENST00000490516 SSPOA2VEC9 5147 aa7.66□□□□□ -1.18
EXOSC3-207ENST00000490516 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
EXOSC3-207ENST00000490516 XKRY2A2RUG3 117 aa7.66□□□□□ -1.18
EXOSC3-207ENST00000490516 Q6ZUT4 128 aa7.66□□□□□ -1.18
EXOSC3-207ENST00000490516 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
EXOSC3-207ENST00000490516 A0A1B0GV50 99 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 PFDN1O60925 122 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 LBHQ53QV2 105 aaPredicted RBP7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 TEX261Q6UWH6 196 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 CNFNQ9BYD5 112 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 CYTL1Q9NRR1 136 aa7.65□□□□□ -1.18
EXOSC3-207ENST00000490516 BORCS7-ASMTA0A0B4J1R7 106 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 M0R2T5 61 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 CENPWQ5EE01 88 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 C3orf22Q8N5N4 141 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 LINC00469Q8N7U9 141 aa7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 CSDC2Q9Y534 153 aaKnown RBP7.64□□□□□ -1.19
EXOSC3-207ENST00000490516 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
EXOSC3-207ENST00000490516 POLR2KP53803 58 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms