RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 BLOC1S1P78537 153 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 COTL1Q14019 142 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 PYDC2Q56P42 97 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 NAP1L6A6NFF2 107 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 H0YIZ8 118 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 M0R2T5 61 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 SMIM17P0DL12 118 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 SS18Q15532 418 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 SPANXN1Q5VSR9 72 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 AMMECR1LQ6DCA0 310 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 RASL11AQ6T310 242 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 Q6ZNX1 250 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 MRPL35Q9NZE8 188 aaKnown RBP3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 ZFP30Q9Y2G7 519 aa3.95□□□□□ -1.78
PDLIM1-203ENST00000490391 A0A1W2PRE2 83 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 H7C423 109 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 PEX7O00628 323 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 TNFRSF6BO95407 300 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 NTF3P20783 257 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 CDC34P49427 236 aaPredicted RBP3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 SSTP61278 116 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 CTDSP1Q9GZU7 261 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 NIT2Q9NQR4 276 aa3.94□□□□□ -1.78
PDLIM1-203ENST00000490391 G3V3Q6 166 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 TRIAP1O43715 76 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 NUPR1O60356 82 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 LTAP01374 205 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 MGPP08493 103 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 ZNF25P17030 456 aaPredicted RBP3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 C10orf25Q5T742 122 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 IMMP2LQ96T52 175 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 SEC22CQ9BRL7 303 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 SMDT1Q9H4I9 107 aa3.93□□□□□ -1.78
PDLIM1-203ENST00000490391 COX7A2LO14548 114 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 SPAG11BQ08648 103 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 OR2D3Q8NGH3 330 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 HIST1H2BAQ96A08 127 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 TMEM167BQ9NRX6 74 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
PDLIM1-203ENST00000490391 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 RPL28P46779 137 aaKnown RBP3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 SCGB1C1Q8TD33 95 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 FMC1Q96HJ9 113 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 SMIM3Q9BZL3 60 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 CDC42SE2Q9NRR3 84 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 C6orf48Q9UBA6 75 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 HSPB11Q9Y547 144 aa3.91□□□□□ -1.78
PDLIM1-203ENST00000490391 BCE1O60756 84 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 NCR2O95944 276 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 CXorf1O96002 111 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 APCSP02743 223 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 LRRC37A5PQ49AS3 106 aa3.9□□□□□ -1.79
PDLIM1-203ENST00000490391 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 IGKV2D-26A0A0A0MRZ7 120 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 FAM74A7A6NL05 159 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 C1orf196B1AJZ1 125 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 CTRLP40313 264 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 UBE2G2P60604 165 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 CNPY1Q3B7I2 92 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 UNQ6190/PRO20217Q6UXQ8 127 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 C5orf38Q86SI9 138 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 C3orf22Q8N5N4 141 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 OR10D4PQ8NGN7 298 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
PDLIM1-203ENST00000490391 A0A1B0GVG6 124 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 F8WDY8 70 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 NDUFA1O15239 70 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 SIX6O95475 246 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 UBE2G1P62253 170 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 MRPL52Q86TS9 123 aaKnown RBP3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 GATD1Q8NB37 220 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 TMEM101Q96IK0 257 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
PDLIM1-203ENST00000490391 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 TMEM241Q24JQ0 296 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 TRIQKQ629K1 86 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 RPL39LQ96EH5 51 aaKnown RBP3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 NKX6-2Q9C056 277 aaPredicted RBP3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 ALG5Q9Y673 324 aa3.87□□□□□ -1.79
PDLIM1-203ENST00000490391 SDHAF1A6NFY7 115 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 CFC1P0CG37 223 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 ATP6V0CP27449 155 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 ZNF726P1Q15940 193 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 MZT2BQ6NZ67 158 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 DAND5Q8N907 189 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms