RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
SEC13-218ENST00000490283 F8W036 122 aa11.26□□□□□ -0.61
SEC13-218ENST00000490283 LINC00862A6NCI5 91 aa11.25□□□□□ -0.61
SEC13-218ENST00000490283 CKS2P33552 79 aa11.25□□□□□ -0.61
SEC13-218ENST00000490283 HBBP68871 147 aa11.25□□□□□ -0.61
SEC13-218ENST00000490283 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
SEC13-218ENST00000490283 MRPL52Q86TS9 123 aaKnown RBP11.25□□□□□ -0.61
SEC13-218ENST00000490283 XCL1P47992 114 aa11.24□□□□□ -0.61
SEC13-218ENST00000490283 SS18Q15532 418 aa11.24□□□□□ -0.61
SEC13-218ENST00000490283 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
SEC13-218ENST00000490283 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
SEC13-218ENST00000490283 NRACQ8N912 160 aa11.24□□□□□ -0.61
SEC13-218ENST00000490283 TMEM18Q96B42 140 aa11.24□□□□□ -0.61
SEC13-218ENST00000490283 TCAPO15273 167 aa11.23□□□□□ -0.61
SEC13-218ENST00000490283 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
SEC13-218ENST00000490283 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
SEC13-218ENST00000490283 DPH3Q96FX2 82 aa11.23□□□□□ -0.61
SEC13-218ENST00000490283 C20orf78Q9BR46 151 aa11.23□□□□□ -0.61
SEC13-218ENST00000490283 LINC00959A0A1B0GUT2 108 aa11.22□□□□□ -0.61
SEC13-218ENST00000490283 CCL25O15444 150 aa11.22□□□□□ -0.61
SEC13-218ENST00000490283 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
SEC13-218ENST00000490283 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
SEC13-218ENST00000490283 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.61
SEC13-218ENST00000490283 FOXI1Q12951 378 aa11.21□□□□□ -0.61
SEC13-218ENST00000490283 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
SEC13-218ENST00000490283 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
SEC13-218ENST00000490283 J3QL48 77 aa11.2□□□□□ -0.62
SEC13-218ENST00000490283 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
SEC13-218ENST00000490283 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
SEC13-218ENST00000490283 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
SEC13-218ENST00000490283 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
SEC13-218ENST00000490283 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
SEC13-218ENST00000490283 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
SEC13-218ENST00000490283 PPBPP02775 128 aa11.19□□□□□ -0.62
SEC13-218ENST00000490283 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
SEC13-218ENST00000490283 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
SEC13-218ENST00000490283 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
SEC13-218ENST00000490283 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
SEC13-218ENST00000490283 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
SEC13-218ENST00000490283 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 D6R8Y8 96 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 MT-ND4LP03901 98 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 SLPIP03973 132 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 CD164L2Q6UWJ8 174 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
SEC13-218ENST00000490283 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
SEC13-218ENST00000490283 PHOX2AO14813 284 aa11.17□□□□□ -0.62
SEC13-218ENST00000490283 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
SEC13-218ENST00000490283 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
SEC13-218ENST00000490283 PANO1I0J062 215 aa11.16□□□□□ -0.62
SEC13-218ENST00000490283 MALP21145 153 aa11.16□□□□□ -0.62
SEC13-218ENST00000490283 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
SEC13-218ENST00000490283 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
SEC13-218ENST00000490283 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
SEC13-218ENST00000490283 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
SEC13-218ENST00000490283 COX6A2Q02221 97 aa11.15□□□□□ -0.62
SEC13-218ENST00000490283 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
SEC13-218ENST00000490283 NPYP01303 97 aa11.14□□□□□ -0.63
SEC13-218ENST00000490283 CHTF8P0CG12 524 aa11.14□□□□□ -0.63
SEC13-218ENST00000490283 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
SEC13-218ENST00000490283 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
SEC13-218ENST00000490283 COX7A2LO14548 114 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 RAB5AP20339 215 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 TMEM136Q6ZRR5 245 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 Q6ZUT4 128 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
SEC13-218ENST00000490283 A0A087WYN8 130 aa11.12□□□□□ -0.63
SEC13-218ENST00000490283 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
SEC13-218ENST00000490283 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
SEC13-218ENST00000490283 KRTAP29-1A8MX34 341 aaPredicted RBP11.11□□□□□ -0.63
SEC13-218ENST00000490283 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
SEC13-218ENST00000490283 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
SEC13-218ENST00000490283 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
SEC13-218ENST00000490283 LAMTOR2Q9Y2Q5 125 aa11.11□□□□□ -0.63
SEC13-218ENST00000490283 APOMO95445 188 aa11.1□□□□□ -0.63
SEC13-218ENST00000490283 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
SEC13-218ENST00000490283 SYCNQ0VAF6 134 aa11.1□□□□□ -0.63
SEC13-218ENST00000490283 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
SEC13-218ENST00000490283 MYCBP2O75592 4640 aa11.1□□□□□ -0.63
SEC13-218ENST00000490283 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
SEC13-218ENST00000490283 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
SEC13-218ENST00000490283 PLAC8Q9NZF1 115 aa11.09□□□□□ -0.63
SEC13-218ENST00000490283 IFI27P40305 119 aaPredicted RBP11.08□□□□□ -0.64
SEC13-218ENST00000490283 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
SEC13-218ENST00000490283 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
SEC13-218ENST00000490283 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
SEC13-218ENST00000490283 STPG4Q8N801 248 aa11.07□□□□□ -0.64
SEC13-218ENST00000490283 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 A0A096LNI7 61 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 LOC389332A0A1B0GUA5 103 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 OXTP01178 125 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 KRTAP3-2Q9BYR7 98 aa11.06□□□□□ -0.64
SEC13-218ENST00000490283 SPAG11BQ08648 103 aa11.04□□□□□ -0.64
SEC13-218ENST00000490283 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms