RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 BTF3L4Q96K17 158 aa8.97□□□□□ -0.97
VTI1A-206ENST00000489142 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
VTI1A-206ENST00000489142 TRBV27A0A0K0K1C4 114 aa8.96□□□□□ -0.98
VTI1A-206ENST00000489142 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-206ENST00000489142 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
VTI1A-206ENST00000489142 MRPL54Q6P161 138 aaKnown RBP8.96□□□□□ -0.98
VTI1A-206ENST00000489142 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-206ENST00000489142 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 C7orf77A4D0Y5 90 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 CCL25O15444 150 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 FCER1GP30273 86 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
VTI1A-206ENST00000489142 FAM104BQ5XKR9 115 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
VTI1A-206ENST00000489142 VCYO14598 125 aa8.94□□□□□ -0.98
VTI1A-206ENST00000489142 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
VTI1A-206ENST00000489142 DPH3Q96FX2 82 aa8.94□□□□□ -0.98
VTI1A-206ENST00000489142 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
VTI1A-206ENST00000489142 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
VTI1A-206ENST00000489142 ZNF664Q8N3J9 261 aa8.93□□□□□ -0.98
VTI1A-206ENST00000489142 CDC42SE2Q9NRR3 84 aa8.93□□□□□ -0.98
VTI1A-206ENST00000489142 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-206ENST00000489142 COX6A2Q02221 97 aa8.92□□□□□ -0.98
VTI1A-206ENST00000489142 SMDT1Q9H4I9 107 aa8.92□□□□□ -0.98
VTI1A-206ENST00000489142 A0A087WYN8 130 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 CKS2P33552 79 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
VTI1A-206ENST00000489142 SS18Q15532 418 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 KIR2DL4Q99706 377 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
VTI1A-206ENST00000489142 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-206ENST00000489142 D6R8Y8 96 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 TNFRSF6BO95407 300 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 PPP1R17O96001 155 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 HBBP68871 147 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 Q6ZUT4 128 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
VTI1A-206ENST00000489142 A0A1B0GW15 77 aa8.89□□□□□ -0.99
VTI1A-206ENST00000489142 PPP1R2P9O14990 202 aa8.89□□□□□ -0.99
VTI1A-206ENST00000489142 NPYP01303 97 aa8.89□□□□□ -0.99
VTI1A-206ENST00000489142 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
VTI1A-206ENST00000489142 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
VTI1A-206ENST00000489142 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 IGHV1-58A0A0C4DH39 117 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 LINC00862A6NCI5 91 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 MAJINQ3KP22 176 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
VTI1A-206ENST00000489142 TRBV24-1A0A075B6N3 115 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 A0A096LNI7 61 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 F8W036 122 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 TCAPO15273 167 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 S100A8P05109 93 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 SMIM2Q9BVW6 85 aa8.87□□□□□ -0.99
VTI1A-206ENST00000489142 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
VTI1A-206ENST00000489142 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-206ENST00000489142 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
VTI1A-206ENST00000489142 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
VTI1A-206ENST00000489142 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
VTI1A-206ENST00000489142 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
VTI1A-206ENST00000489142 PHOX2AO14813 284 aa8.85□□□□□ -0.99
VTI1A-206ENST00000489142 MALP21145 153 aa8.85□□□□□ -0.99
VTI1A-206ENST00000489142 RAB14P61106 215 aa8.85□□□□□ -0.99
VTI1A-206ENST00000489142 RPL32P62910 135 aaKnown RBP8.85□□□□□ -0.99
VTI1A-206ENST00000489142 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
VTI1A-206ENST00000489142 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 COX7A2LO14548 114 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 SMAGPQ0VAQ4 97 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 STPG4Q8N801 248 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 FAM104AQ969W3 186 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 TMEM18Q96B42 140 aa8.84□□□□□ -0.99
VTI1A-206ENST00000489142 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 SYCNQ0VAF6 134 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 ORMDL3Q8N138 153 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 PRELID3AQ96N28 172 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
VTI1A-206ENST00000489142 LOC389332A0A1B0GUA5 103 aa8.82□□□□□ -1
VTI1A-206ENST00000489142 OXTP01178 125 aa8.82□□□□□ -1
VTI1A-206ENST00000489142 PPBPP02775 128 aa8.82□□□□□ -1
VTI1A-206ENST00000489142 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
VTI1A-206ENST00000489142 Q6ZRU5 148 aa8.82□□□□□ -1
VTI1A-206ENST00000489142 PNRC1Q12796 327 aaPredicted RBP8.81□□□□□ -1
VTI1A-206ENST00000489142 C7orf33Q8WU49 177 aa8.81□□□□□ -1
VTI1A-206ENST00000489142 MT-ND4LP03901 98 aa8.8□□□□□ -1
VTI1A-206ENST00000489142 GAGE2BQ13066 116 aa8.8□□□□□ -1
VTI1A-206ENST00000489142 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
VTI1A-206ENST00000489142 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
VTI1A-206ENST00000489142 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
VTI1A-206ENST00000489142 A0A0J9YXV3 536 aa8.79□□□□□ -1
VTI1A-206ENST00000489142 IFITM10A6NMD0 228 aa8.79□□□□□ -1
VTI1A-206ENST00000489142 RAB5AP20339 215 aa8.79□□□□□ -1
VTI1A-206ENST00000489142 SPAG11BQ08648 103 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms