RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 ALKQ9UM73 1620 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 NUMA1Q14980 2115 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 HIGD1CA8MV81 97 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 HMGN4O00479 90 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 SPINT3P49223 89 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 C1orf137Q5JT78 98 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 LENEPQ9Y5L5 61 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 KIAA2026Q5HYC2 2103 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 LCTP09848 1927 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 LTBP1Q14766 1721 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 ATRXP46100 2492 aa2.93□□□□□ -1.94
CTNNB1-215ENST00000488914 MGAMO43451 1857 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 GREB1Q4ZG55 1949 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 LINC01549A6NIU2 74 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 D6R8Y8 96 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 IGLV1-47P01700 117 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 ERHP84090 104 aaKnown RBP2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 Q86TA4 180 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 MUSTN1Q8IVN3 82 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 ABRACLQ9P1F3 81 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 LHFPL6Q9Y693 200 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 KIF21BO75037 1637 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 PAPPAQ13219 1627 aa2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 MUC22E2RYF6 1773 aaPredicted RBP2.92□□□□□ -1.94
CTNNB1-215ENST00000488914 PTPRSQ13332 1948 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 MRC1P22897 1456 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 EIF2AK4Q9P2K8 1649 aaKnown RBP2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 GDF5OSQ5U4N7 250 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 UBALD1Q8TB05 177 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 KLK12Q9UKR0 248 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 LOC285556D6RIA3 1793 aa2.91□□□□□ -1.94
CTNNB1-215ENST00000488914 NUP188Q5SRE5 1749 aa2.9□□□□□ -1.94
CTNNB1-215ENST00000488914 SCN3AQ9NY46 2000 aa2.9□□□□□ -1.94
CTNNB1-215ENST00000488914 MUC4Q99102 2169 aa2.9□□□□□ -1.94
CTNNB1-215ENST00000488914 PLCH1Q4KWH8 1693 aa2.9□□□□□ -1.95
CTNNB1-215ENST00000488914 A0A0J9YX75 114 aa2.9□□□□□ -1.95
CTNNB1-215ENST00000488914 KPRPQ5T749 579 aaPredicted RBP2.9□□□□□ -1.95
CTNNB1-215ENST00000488914 AMELXQ99217 191 aa2.9□□□□□ -1.95
CTNNB1-215ENST00000488914 ARFGEF1Q9Y6D6 1849 aa2.9□□□□□ -1.95
CTNNB1-215ENST00000488914 NHSQ6T4R5 1651 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 ADAMTS7Q9UKP4 1686 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 TRBV30A0A0K0K1B3 111 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 CLPSL1A2RUU4 121 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 POLR1AO95602 1720 aaPredicted RBP2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 PPYP01298 95 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 CISD3P0C7P0 127 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 S100A3P33764 101 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 FAM74A4Q5TZK3 123 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 MRPL36Q9P0J6 103 aaKnown RBP2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 ORMDL1Q9P0S3 153 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 KIAA1549Q9HCM3 1950 aa2.89□□□□□ -1.95
CTNNB1-215ENST00000488914 WDR90Q96KV7 1748 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 NACAE9PAV3 2078 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 A0A0J9YY99 117 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 NUPR2A6NF83 97 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 IGHV3-30P01768 117 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 IGHV3-30-5P0DP03 117 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 HMGA1P17096 107 aaKnown RBP2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 CNBPP62633 177 aaKnown RBP2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 LYPD1Q8N2G4 141 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 C9orf163Q8N9P6 203 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 TXNDC17Q9BRA2 123 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 TJP1Q07157 1748 aa2.88□□□□□ -1.95
CTNNB1-215ENST00000488914 EML5Q05BV3 1969 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 MED13Q9UHV7 2174 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 PPP1R17O96001 155 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 PDE6HQ13956 83 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 SPAG11AQ6PDA7 123 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 LAMB2P55268 1798 aa2.87□□□□□ -1.95
CTNNB1-215ENST00000488914 TSC2P49815 1807 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 KIAA1549LQ6ZVL6 1849 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 MYO16Q9Y6X6 1858 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 GTF3C1Q12789 2109 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 TRBV6-5A0A0K0K1A5 114 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 IFI6P09912 130 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 C4orf3Q8WVX3 66 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 ATP7AQ04656 1500 aa2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 PHRF1Q9P1Y6 1649 aaKnown RBP2.86□□□□□ -1.95
CTNNB1-215ENST00000488914 DOCK11Q5JSL3 2073 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 Q9BRP9 147 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 PSORS1C2Q9UIG4 136 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 ADGRB2O60241 1585 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 CPAMD8Q8IZJ3 1885 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 DLG5Q8TDM6 1919 aa2.85□□□□□ -1.95
CTNNB1-215ENST00000488914 IGKV3-7A0A075B6H7 116 aa2.84□□□□□ -1.95
CTNNB1-215ENST00000488914 MALRD1Q5VYJ5 2156 aa2.84□□□□□ -1.96
CTNNB1-215ENST00000488914 CLTCL1P53675 1640 aa2.83□□□□□ -1.96
CTNNB1-215ENST00000488914 C3P01024 1663 aa2.83□□□□□ -1.96
CTNNB1-215ENST00000488914 IGLV4-69A0A075B6H9 119 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms